RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MED14OSP0DP75 135 aa11.54□□□□□ -0.56
SHOX2-202ENST00000425436 TSPOP30536 169 aa11.54□□□□□ -0.56
SHOX2-202ENST00000425436 AMTP48728 403 aa11.54□□□□□ -0.56
SHOX2-202ENST00000425436 DEFB125Q8N687 156 aa11.54□□□□□ -0.56
SHOX2-202ENST00000425436 OR11H12B2RN74 326 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 SNAI2O43623 268 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 PPBPP02775 128 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 ZNF124Q15973 351 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 PSMG4Q5JS54 123 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 NIT1Q86X76 327 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 C19orf73Q9NVV2 129 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 U3KQK5 164 aa11.53□□□□□ -0.56
SHOX2-202ENST00000425436 KLLNB2CW77 178 aa11.52□□□□□ -0.57
SHOX2-202ENST00000425436 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
SHOX2-202ENST00000425436 FOXI2Q6ZQN5 318 aa11.52□□□□□ -0.57
SHOX2-202ENST00000425436 ORMDL3Q8N138 153 aa11.52□□□□□ -0.57
SHOX2-202ENST00000425436 RCHY1Q96PM5 261 aa11.52□□□□□ -0.57
SHOX2-202ENST00000425436 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.57
SHOX2-202ENST00000425436 A0A0J9YX75 114 aa11.51□□□□□ -0.57
SHOX2-202ENST00000425436 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
SHOX2-202ENST00000425436 LINC00614P0C842 121 aa11.51□□□□□ -0.57
SHOX2-202ENST00000425436 IGHV4-30-4P0DP06 118 aa11.51□□□□□ -0.57
SHOX2-202ENST00000425436 RNASE4P34096 147 aaKnown RBP11.51□□□□□ -0.57
SHOX2-202ENST00000425436 MAP6D1Q9H9H5 199 aa11.51□□□□□ -0.57
SHOX2-202ENST00000425436 LAMTOR2Q9Y2Q5 125 aa11.51□□□□□ -0.57
SHOX2-202ENST00000425436 PRKDCP78527 4128 aaKnown RBP11.51□□□□□ -0.57
SHOX2-202ENST00000425436 PCP4L1A6NKN8 68 aa11.5□□□□□ -0.57
SHOX2-202ENST00000425436 F6UB75 175 aa11.5□□□□□ -0.57
SHOX2-202ENST00000425436 ASIPP42127 132 aa11.5□□□□□ -0.57
SHOX2-202ENST00000425436 DEFB131AP59861 70 aa11.5□□□□□ -0.57
SHOX2-202ENST00000425436 RNASEKQ6P5S7 137 aaKnown RBP11.5□□□□□ -0.57
SHOX2-202ENST00000425436 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
SHOX2-202ENST00000425436 S100A4P26447 101 aaKnown RBP11.5□□□□□ -0.57
SHOX2-202ENST00000425436 PRR9Q5T870 116 aa11.5□□□□□ -0.57
SHOX2-202ENST00000425436 GSN-AS1Q9NRJ2 163 aa11.5□□□□□ -0.57
SHOX2-202ENST00000425436 CKS2P33552 79 aa11.49□□□□□ -0.57
SHOX2-202ENST00000425436 SPANXN1Q5VSR9 72 aa11.49□□□□□ -0.57
SHOX2-202ENST00000425436 Q6ZWC4 215 aa11.49□□□□□ -0.57
SHOX2-202ENST00000425436 AMN1Q8IY45 258 aa11.49□□□□□ -0.57
SHOX2-202ENST00000425436 NAGKQ9UJ70 344 aa11.49□□□□□ -0.57
SHOX2-202ENST00000425436 M0R2Z0 102 aa11.48□□□□□ -0.57
SHOX2-202ENST00000425436 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
SHOX2-202ENST00000425436 MRPL51Q4U2R6 128 aaKnown RBP11.48□□□□□ -0.57
SHOX2-202ENST00000425436 FAM159AQ6UWV7 190 aa11.48□□□□□ -0.57
SHOX2-202ENST00000425436 PRSS3P2Q8NHM4 247 aa11.48□□□□□ -0.57
SHOX2-202ENST00000425436 PRELID3AQ96N28 172 aa11.48□□□□□ -0.57
SHOX2-202ENST00000425436 AGRNO00468 2067 aa11.48□□□□□ -0.57
SHOX2-202ENST00000425436 C7orf71A4D174 169 aa11.47□□□□□ -0.57
SHOX2-202ENST00000425436 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
SHOX2-202ENST00000425436 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
SHOX2-202ENST00000425436 D6R8Y8 96 aa11.47□□□□□ -0.57
SHOX2-202ENST00000425436 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
SHOX2-202ENST00000425436 DEFB1P60022 68 aa11.47□□□□□ -0.57
SHOX2-202ENST00000425436 ANXA2RQ3ZCQ2 193 aa11.47□□□□□ -0.57
SHOX2-202ENST00000425436 MUC21A0A0G2JKD1 596 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 MUC21A0A140T8X8 626 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 J3KRW8 73 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 CDKN1BP46527 198 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 SSTP61278 116 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 PKIAP61925 76 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 TDRG1Q3Y452 100 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 MUC21Q5SSG8 566 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 FA2HQ7L5A8 372 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 FAM110AQ9BQ89 295 aa11.46□□□□□ -0.57
SHOX2-202ENST00000425436 KNCNA6PVL3 124 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 TSTD3H0UI37 97 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 AP5S1Q9NUS5 200 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 A8MZ25 164 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 RPL35AP18077 110 aaKnown RBP11.45□□□□□ -0.58
SHOX2-202ENST00000425436 FAM19A2Q8N3H0 131 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 URB1-AS1Q96HZ7 61 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
SHOX2-202ENST00000425436 A8MTW9 85 aa11.44□□□□□ -0.58
SHOX2-202ENST00000425436 H3BVH4 76 aa11.44□□□□□ -0.58
SHOX2-202ENST00000425436 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
SHOX2-202ENST00000425436 KRTDAPP60985 99 aa11.44□□□□□ -0.58
SHOX2-202ENST00000425436 HSPB8Q9UJY1 196 aa11.44□□□□□ -0.58
SHOX2-202ENST00000425436 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
SHOX2-202ENST00000425436 SBSPONQ8IVN8 264 aa11.43□□□□□ -0.58
SHOX2-202ENST00000425436 MRAP2Q96G30 205 aa11.43□□□□□ -0.58
SHOX2-202ENST00000425436 CLUHP3Q96NS8 147 aa11.43□□□□□ -0.58
SHOX2-202ENST00000425436 MAP1LC3AQ9H492 121 aa11.43□□□□□ -0.58
SHOX2-202ENST00000425436 NBEAL2Q6ZNJ1 2754 aa11.42□□□□□ -0.58
SHOX2-202ENST00000425436 COL7A1Q02388 2944 aa11.42□□□□□ -0.58
SHOX2-202ENST00000425436 LEPROTL1O95214 131 aa11.42□□□□□ -0.58
SHOX2-202ENST00000425436 BTF3P20290 206 aaKnown RBP11.42□□□□□ -0.58
SHOX2-202ENST00000425436 CDPF1Q6NVV7 123 aa11.42□□□□□ -0.58
SHOX2-202ENST00000425436 Q6ZQT7 251 aa11.42□□□□□ -0.58
SHOX2-202ENST00000425436 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
SHOX2-202ENST00000425436 TRAV12-3A0A0B4J271 114 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 H3BMM0 161 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 PPP1R17O96001 155 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 C3orf79P0CE67 100 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 EVI2AP22794 236 aa11.41□□□□□ -0.58
SHOX2-202ENST00000425436 PMCHL1Q16048 86 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms