RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 HINT1P49773 126 aaPredicted RBP2.22□□□□□ -2.05
SF3B1-205ENST00000424674 LY6EQ16553 131 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 NDUFA11Q86Y39 141 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 OR10AG1Q8NH19 301 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 C4orf3Q8WVX3 66 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 Q9BRP9 147 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 SPCS1Q9Y6A9 102 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 KIDINS220Q9ULH0 1771 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 ARHGEF12Q9NZN5 1544 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 SBF2Q86WG5 1849 aa2.21□□□□□ -2.05
SF3B1-205ENST00000424674 ARHGAP21Q5T5U3 1957 aa2.21□□□□□ -2.05
SF3B1-205ENST00000424674 TNRC6AQ8NDV7 1962 aaKnown RBP2.21□□□□□ -2.05
SF3B1-205ENST00000424674 ZNF318Q5VUA4 2279 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 IGKV3D-11A0A0A0MRZ8 115 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 TRAV13-2A0A0B4J235 113 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 KANTRA0A1W2PQU2 76 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 CCL16O15467 120 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 HMGN3Q15651 99 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 DEFB113Q30KQ7 82 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.21□□□□□ -2.06
SF3B1-205ENST00000424674 ZCCHC23Q6ZST2 131 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 ANKARQ7Z5J8 1434 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 R4GN34 69 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 ABCA7Q8IZY2 2146 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 MCM3APO60318 1980 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 ADGRB3O60242 1522 aa2.21□□□□□ -2.06
SF3B1-205ENST00000424674 NUP214P35658 2090 aaPredicted RBP2.21□□□□□ -2.06
SF3B1-205ENST00000424674 SMARCA4P51532 1647 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 WDR90Q96KV7 1748 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 KIF20BQ96Q89 1820 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 MUC21A0A140T8X8 626 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 CRYM-AS1A6NIL9 109 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 HCG22E2RYF7 251 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 NUPR1O60356 82 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 IGKV3-11P04433 115 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 IGLC2P0DOY2 106 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 IGLC3P0DOY3 106 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 ZNF833PQ6ZTB9 187 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 Q8TAT8 98 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 TP53TG3Q9ULZ0 132 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 C22orf24Q9Y442 160 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 COL27A1Q8IZC6 1860 aaPredicted RBP2.2□□□□□ -2.06
SF3B1-205ENST00000424674 GOLGA3Q08378 1498 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 CDC42BPBQ9Y5S2 1711 aa2.2□□□□□ -2.06
SF3B1-205ENST00000424674 THADAQ6YHU6 1953 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 ADAMTS12P58397 1594 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 LAMC3Q9Y6N6 1575 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 ZSWIM8A7E2V4 1837 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 SLX4Q8IY92 1834 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 LCTP09848 1927 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 PPLO60437 1756 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 TRBV7-1A0A0A6YYK4 115 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 A0A1W2PPM0 123 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 TMEM30CPA0ZSE6 113 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 BCE1O60756 84 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 SIX6O95475 246 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 CFDP00746 253 aaPredicted RBP2.19□□□□□ -2.06
SF3B1-205ENST00000424674 IGKV3-15P01624 115 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 IGHV3-33P01772 117 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 SMIM11AP58511 58 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 NDPQ00604 133 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 KRTAP26-1Q6PEX3 210 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 Q6ZTI0 123 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 CLECL1Q8IZS7 167 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 C9orf163Q8N9P6 203 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 CMTM2Q8TAZ6 248 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 NXT2Q9NPJ8 142 aaKnown RBP2.19□□□□□ -2.06
SF3B1-205ENST00000424674 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 LINC00474Q9P2X8 69 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 KDM6BO15054 1643 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 NCOA2Q15596 1464 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 PARP14Q460N5 1801 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 ARID1AO14497 2285 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 MYLKQ15746 1914 aa2.19□□□□□ -2.06
SF3B1-205ENST00000424674 TOPAZ1Q8N9V7 1692 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 EEA1Q15075 1411 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 SHANK3Q9BYB0 1731 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 IGLV3-16A0A075B6K0 115 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 CXorf51AA0A1B0GTR3 108 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 SYS1-DBNDD2H3BUS1 97 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 P0C880 135 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 PDE6HQ13956 83 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 ETDBQ3ZM63 59 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 NMSQ5H8A3 153 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 BVES-AS1Q5T3Y7 98 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 LYPD1Q8N2G4 141 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 SCN4AP35499 1836 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 TUBGCP6Q96RT7 1819 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 TRPM6Q9BX84 2022 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 NLRP1Q9C000 1473 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 DOCK1Q14185 1865 aa2.18□□□□□ -2.06
SF3B1-205ENST00000424674 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.17□□□□□ -2.06
SF3B1-205ENST00000424674 HEATR5AQ86XA9 2040 aa2.17□□□□□ -2.06
SF3B1-205ENST00000424674 SNRPFP62306 86 aaKnown RBP2.17□□□□□ -2.06
SF3B1-205ENST00000424674 CNBPP62633 177 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms