RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 GTF3C1Q12789 2109 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 TANC2Q9HCD6 1990 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 TRBV25-1A0A075B6N4 114 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 IGHV3OR16-13A0A075B7E8 117 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 TRGV8A0A0C4DH27 118 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 CRYM-AS1A6NIL9 109 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 IQCF6A8MYZ5 107 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 H3BVH4 76 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 NDUFC1O43677 76 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 FRMD6-AS1P0C7T7 363 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 PIRTP0C851 137 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 CD28P10747 220 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 ZNF22P17026 224 aaPredicted RBP2.03□□□□□ -2.08
PMS1-209ENST00000424059 S100A4P26447 101 aaKnown RBP2.03□□□□□ -2.08
PMS1-209ENST00000424059 KLKP1Q107X0 134 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 FAM229BQ4G0N7 80 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 S100A7L2Q5SY68 101 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 ZNF497Q6ZNH5 498 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 C17orf82Q86X59 251 aaPredicted RBP2.03□□□□□ -2.08
PMS1-209ENST00000424059 CCL4L1Q8NHW4 92 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 SMCR5Q8TEV8 140 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 TMEM190Q8WZ59 177 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 C11orf52Q96A22 123 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 BPESC1Q9GZL8 116 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 COL4A6Q14031 1691 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 PAPPA2Q9BXP8 1791 aa2.03□□□□□ -2.09
PMS1-209ENST00000424059 PLXNA3P51805 1871 aa2.03□□□□□ -2.09
PMS1-209ENST00000424059 IGLV9-49A0A0B4J1Y8 123 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 TRAV3A0A0B4J244 114 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 IGKV1-12A0A0C4DH73 117 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 TEX49A0A1B0GTD5 131 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 A0A1B0GWA3 101 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 PINLYPA6NC86 204 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 PEX7O00628 323 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 ATP6V0E1O15342 81 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 IGKV1D-12P01611 117 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 IGLV1-44P01699 117 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 PATE4P0C8F1 98 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 NPPCP23582 126 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 FGF12P61328 243 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 ESRGQ1W209 222 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 SCXQ7RTU7 201 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 SND1-IT1Q9HBX3 110 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 LTBP4Q8N2S1 1624 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 NUP98P52948 1817 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 DUOX1Q9NRD9 1551 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 LRRK1Q38SD2 2015 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 TRPM6Q9BX84 2022 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 NUMA1Q14980 2115 aa2.02□□□□□ -2.09
PMS1-209ENST00000424059 IGLV3-12A0A075B6K2 115 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 LINC01549A6NIU2 74 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 SMIM1B2RUZ4 78 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 GNRH2O43555 120 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 CRYBA2P53672 197 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 SMIM11AP58511 58 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 SUPT4H1P63272 117 aaKnown RBP2.01□□□□□ -2.09
PMS1-209ENST00000424059 SYCNQ0VAF6 134 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 SOSTDC1Q6X4U4 206 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 FAM216BQ8N7L0 139 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 HIST1H4GQ99525 98 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 DYNLRB1Q9NP97 96 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 V9GYV3 84 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 COL16A1Q07092 1604 aaPredicted RBP2.01□□□□□ -2.09
PMS1-209ENST00000424059 PLXNB3Q9ULL4 1909 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 IGHV1-45A0A0A0MS14 117 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 IGKV6D-21A0A0A0MT36 114 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 IGHV3-20A0A0C4DH32 117 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 LOC107984156A0A0G2JMH3 177 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 C16orf90A8MZG2 172 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 C3orf84H3BNL1 204 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 IGHV4-34P06331 123 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 LPAL2Q16609 132 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.01□□□□□ -2.09
PMS1-209ENST00000424059 ADAMTSL4-AS1Q5T5F5 129 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 Q6JHZ5 121 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 SLC48A1Q6P1K1 146 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 VMO1Q7Z5L0 202 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 ARL17AQ8IVW1 177 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 LINC00269Q8N2A0 174 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 DAND5Q8N907 189 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 CLEC2BQ92478 149 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 KIAA2026Q5HYC2 2103 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 PTPRSQ13332 1948 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 GREB1Q4ZG55 1949 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 LTBP2Q14767 1821 aa2.01□□□□□ -2.09
PMS1-209ENST00000424059 BAZ2BQ9UIF8 2168 aaKnown RBP2□□□□□ -2.09
PMS1-209ENST00000424059 MGAMO43451 1857 aa2□□□□□ -2.09
PMS1-209ENST00000424059 SCN7AQ01118 1682 aa2□□□□□ -2.09
PMS1-209ENST00000424059 LMO7Q8WWI1 1683 aa2□□□□□ -2.09
PMS1-209ENST00000424059 IGHV3OR16-12A0A075B7B8 117 aa2□□□□□ -2.09
PMS1-209ENST00000424059 IGLV5-45A0A087WSX0 123 aa2□□□□□ -2.09
PMS1-209ENST00000424059 IGKV6-21A0A0C4DH24 114 aa2□□□□□ -2.09
PMS1-209ENST00000424059 SMIM27A0A1W2PRY6 76 aa2□□□□□ -2.09
PMS1-209ENST00000424059 C11orf94C9JXX5 98 aa2□□□□□ -2.09
PMS1-209ENST00000424059 E7EUB6 86 aa2□□□□□ -2.09
PMS1-209ENST00000424059 J3QLW9 94 aa2□□□□□ -2.09
PMS1-209ENST00000424059 PIN1P1O15428 100 aa2□□□□□ -2.09
PMS1-209ENST00000424059 IGHV3-43DP0DP04 118 aa2□□□□□ -2.09
PMS1-209ENST00000424059 MGST1P10620 155 aaKnown RBP2□□□□□ -2.09
PMS1-209ENST00000424059 SERF2P84101 59 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms