RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 PRADC1Q9BSG0 188 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 CYTL1Q9NRR1 136 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 MSRB1Q9NZV6 116 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 IGHV3-73A0A0B4J1V6 119 aa17.28■□□□□ 0.36
SMDT1-202ENST00000422252 TRBV6-4A0A1B0GX49 114 aa17.28■□□□□ 0.36
SMDT1-202ENST00000422252 RHOHQ15669 191 aa17.28■□□□□ 0.36
SMDT1-202ENST00000422252 HIST1H2BAQ96A08 127 aa17.28■□□□□ 0.36
SMDT1-202ENST00000422252 APOBP04114 4563 aaKnown RBP17.28■□□□□ 0.36
SMDT1-202ENST00000422252 IGKV3D-20A0A0C4DH25 116 aa17.27■□□□□ 0.36
SMDT1-202ENST00000422252 C10orf126Q8N4M7 172 aa17.27■□□□□ 0.36
SMDT1-202ENST00000422252 MAP1LC3B2A6NCE7 125 aa17.26■□□□□ 0.35
SMDT1-202ENST00000422252 FABP5P3A8MUU1 101 aa17.26■□□□□ 0.35
SMDT1-202ENST00000422252 CRYGDP07320 174 aa17.26■□□□□ 0.35
SMDT1-202ENST00000422252 Q86TA4 180 aa17.26■□□□□ 0.35
SMDT1-202ENST00000422252 MAP1LC3BQ9GZQ8 125 aa17.26■□□□□ 0.35
SMDT1-202ENST00000422252 PGPEP1Q9NXJ5 209 aa17.26■□□□□ 0.35
SMDT1-202ENST00000422252 S100A4P26447 101 aaKnown RBP17.25■□□□□ 0.35
SMDT1-202ENST00000422252 MGST1P10620 155 aaKnown RBP17.24■□□□□ 0.35
SMDT1-202ENST00000422252 IGHV3-38A0A0C4DH36 116 aa17.23■□□□□ 0.35
SMDT1-202ENST00000422252 SMLR1H3BR10 107 aa17.23■□□□□ 0.35
SMDT1-202ENST00000422252 ASIPP42127 132 aa17.23■□□□□ 0.35
SMDT1-202ENST00000422252 A0A087WTM6 91 aa17.22■□□□□ 0.35
SMDT1-202ENST00000422252 TRAV8-6A0A0B4J262 113 aa17.22■□□□□ 0.35
SMDT1-202ENST00000422252 PIK3CD-AS1Q5SR53 167 aa17.22■□□□□ 0.35
SMDT1-202ENST00000422252 CDPF1Q6NVV7 123 aa17.22■□□□□ 0.35
SMDT1-202ENST00000422252 ZFP30Q9Y2G7 519 aa17.22■□□□□ 0.35
SMDT1-202ENST00000422252 A8MWV9 139 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 B4DEV8 164 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 LINC01556Q5JQF7 62 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 OR10J3Q5JRS4 329 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 STOML3Q8TAV4 291 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 ZC2HC1AQ96GY0 325 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 FMC1Q96HJ9 113 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 PARLQ9H300 379 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 IL36BQ9NZH7 164 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 BOLA1Q9Y3E2 137 aa17.21■□□□□ 0.35
SMDT1-202ENST00000422252 FUSP35637 526 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMDT1-202ENST00000422252 CRIP1P50238 77 aa17.2■□□□□ 0.34
SMDT1-202ENST00000422252 UBE2G1P62253 170 aa17.2■□□□□ 0.34
SMDT1-202ENST00000422252 LGALSLQ3ZCW2 172 aaPredicted RBP17.2■□□□□ 0.34
SMDT1-202ENST00000422252 ZFP2Q6ZN57 461 aa17.2■□□□□ 0.34
SMDT1-202ENST00000422252 COX8CQ7Z4L0 72 aa17.2■□□□□ 0.34
SMDT1-202ENST00000422252 Q8N1X5 172 aa17.2■□□□□ 0.34
SMDT1-202ENST00000422252 FHITP49789 147 aa17.19■□□□□ 0.34
SMDT1-202ENST00000422252 ZNF345Q14585 488 aa17.19■□□□□ 0.34
SMDT1-202ENST00000422252 KCNRGQ8N5I3 272 aa17.19■□□□□ 0.34
SMDT1-202ENST00000422252 TCEAL7Q9BRU2 100 aa17.19■□□□□ 0.34
SMDT1-202ENST00000422252 GTSF1LQ9H1H1 148 aa17.19■□□□□ 0.34
SMDT1-202ENST00000422252 KRBOX1C9JBD0 128 aa17.18■□□□□ 0.34
SMDT1-202ENST00000422252 DNLZQ5SXM8 178 aa17.18■□□□□ 0.34
SMDT1-202ENST00000422252 LELP1Q5T871 98 aa17.18■□□□□ 0.34
SMDT1-202ENST00000422252 CST9LP1Q5W188 147 aa17.18■□□□□ 0.34
SMDT1-202ENST00000422252 Q6ZSN1 163 aa17.18■□□□□ 0.34
SMDT1-202ENST00000422252 ATP6V0E2Q8NHE4 81 aa17.18■□□□□ 0.34
SMDT1-202ENST00000422252 H3BVH4 76 aa17.17■□□□□ 0.34
SMDT1-202ENST00000422252 SH2D1AO60880 128 aa17.17■□□□□ 0.34
SMDT1-202ENST00000422252 FAM162BQ5T6X4 162 aa17.17■□□□□ 0.34
SMDT1-202ENST00000422252 TRBV6-1A0A0K0K1D8 114 aa17.16■□□□□ 0.34
SMDT1-202ENST00000422252 M0R036 132 aa17.16■□□□□ 0.34
SMDT1-202ENST00000422252 JPT2Q9H910 190 aa17.16■□□□□ 0.34
SMDT1-202ENST00000422252 IBA57-AS1B1ANH7 110 aa17.15■□□□□ 0.34
SMDT1-202ENST00000422252 LTAP01374 205 aa17.15■□□□□ 0.34
SMDT1-202ENST00000422252 SEC11BP0C7V7 166 aa17.15■□□□□ 0.34
SMDT1-202ENST00000422252 UFSP1Q6NVU6 142 aa17.15■□□□□ 0.34
SMDT1-202ENST00000422252 SYT8Q8NBV8 401 aa17.15■□□□□ 0.34
SMDT1-202ENST00000422252 SCRT2Q9NQ03 307 aa17.15■□□□□ 0.34
SMDT1-202ENST00000422252 HMSDA8MTL9 139 aa17.14■□□□□ 0.33
SMDT1-202ENST00000422252 ARMS2P0C7Q2 107 aa17.14■□□□□ 0.33
SMDT1-202ENST00000422252 ZNF674Q2M3X9 581 aa17.14■□□□□ 0.33
SMDT1-202ENST00000422252 DMRTA1Q5VZB9 504 aa17.14■□□□□ 0.33
SMDT1-202ENST00000422252 GRIFINA4D1Z8 144 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 GAGE12JA6NER3 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 UMAD1C9J7I0 102 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 PSCAO43653 123 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 PAGE4O60829 102 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 IGHV3-30P01768 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 IGHV3-33P01772 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 LINC00694P0DN24 101 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 IGHV3-30-3P0DP02 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 IGHV3-30-5P0DP03 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 AKR1C3P42330 323 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 GAGE1Q13065 139 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 GAGE4Q13068 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 GAGE5Q13069 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 GAGE13Q4V321 117 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 OR11H4Q8NGC9 324 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 SFT2D1Q8WV19 159 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 SAMD10Q9BYL1 202 aa17.13■□□□□ 0.33
SMDT1-202ENST00000422252 A0A0D9SG52 128 aa17.12■□□□□ 0.33
SMDT1-202ENST00000422252 LINC01559Q495D7 138 aa17.12■□□□□ 0.33
SMDT1-202ENST00000422252 FAM213BQ8TBF2 198 aa17.12■□□□□ 0.33
SMDT1-202ENST00000422252 MBD3L1Q8WWY6 194 aa17.12■□□□□ 0.33
SMDT1-202ENST00000422252 RHODO00212 210 aa17.11■□□□□ 0.33
SMDT1-202ENST00000422252 ZNF471Q9BX82 626 aaPredicted RBP17.11■□□□□ 0.33
SMDT1-202ENST00000422252 PHLDA3Q9Y5J5 127 aa17.11■□□□□ 0.33
SMDT1-202ENST00000422252 KANTRA0A1W2PQU2 76 aa17.1■□□□□ 0.33
SMDT1-202ENST00000422252 BCL2L11O43521 198 aa17.1■□□□□ 0.33
SMDT1-202ENST00000422252 C14orf178Q8N769 122 aaPredicted RBP17.1■□□□□ 0.33
SMDT1-202ENST00000422252 Q9HAA7 133 aa17.1■□□□□ 0.33
SMDT1-202ENST00000422252 TMSB15BA0A087X1C1 80 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms