RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 ZNF80P51504 273 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-212ENST00000420013 SLC25A29Q8N8R3 303 aa13.75□□□□□ -0.21
MCF2L-212ENST00000420013 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
MCF2L-212ENST00000420013 TRAV8-6A0A0B4J262 113 aa13.74□□□□□ -0.21
MCF2L-212ENST00000420013 IGLV2-11P01706 119 aa13.74□□□□□ -0.21
MCF2L-212ENST00000420013 FGF8P55075 233 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-212ENST00000420013 PIK3CD-AS1Q5SR53 167 aa13.74□□□□□ -0.21
MCF2L-212ENST00000420013 TRAV34A0A0B4J273 112 aa13.73□□□□□ -0.21
MCF2L-212ENST00000420013 EPM2AB3EWF7 344 aa13.73□□□□□ -0.21
MCF2L-212ENST00000420013 S100A4P26447 101 aaKnown RBP13.73□□□□□ -0.21
MCF2L-212ENST00000420013 ZNF506Q5JVG8 444 aa13.73□□□□□ -0.21
MCF2L-212ENST00000420013 NKX6-2Q9C056 277 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-212ENST00000420013 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
MCF2L-212ENST00000420013 LELP1Q5T871 98 aa13.72□□□□□ -0.21
MCF2L-212ENST00000420013 DPPA3Q6W0C5 159 aa13.72□□□□□ -0.21
MCF2L-212ENST00000420013 STOML3Q8TAV4 291 aa13.72□□□□□ -0.21
MCF2L-212ENST00000420013 NTN5Q8WTR8 489 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-212ENST00000420013 LINC00479Q96M42 142 aa13.72□□□□□ -0.21
MCF2L-212ENST00000420013 MAP1LC3B2A6NCE7 125 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 IBA57-AS1B1ANH7 110 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 SMLR1H3BR10 107 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 PEX7O00628 323 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 PSCAO43653 123 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 RNASE3P12724 160 aaKnown RBP13.71□□□□□ -0.21
MCF2L-212ENST00000420013 LAGE3Q14657 143 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 OR10J3Q5JRS4 329 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 MAP1LC3BQ9GZQ8 125 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 ARL2-SNX15V9GYD0 113 aa13.71□□□□□ -0.21
MCF2L-212ENST00000420013 IGHV3-73A0A0B4J1V6 119 aa13.7□□□□□ -0.22
MCF2L-212ENST00000420013 PGPEP1LA6NFU8 196 aa13.7□□□□□ -0.22
MCF2L-212ENST00000420013 HIST1H2BAQ96A08 127 aa13.7□□□□□ -0.22
MCF2L-212ENST00000420013 FABP5P3A8MUU1 101 aa13.69□□□□□ -0.22
MCF2L-212ENST00000420013 A8MWV9 139 aa13.69□□□□□ -0.22
MCF2L-212ENST00000420013 FUSP35637 526 aaKnown RBP eCLIP13.69□□□□□ -0.22
MCF2L-212ENST00000420013 XGP55808 180 aa13.69□□□□□ -0.22
MCF2L-212ENST00000420013 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
MCF2L-212ENST00000420013 Q6ZNX1 250 aa13.69□□□□□ -0.22
MCF2L-212ENST00000420013 GTSF1LQ9H1H1 148 aa13.69□□□□□ -0.22
MCF2L-212ENST00000420013 FAM74A7A6NL05 159 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 GCSHP23434 173 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 ASIPP42127 132 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 KRTAP10-1P60331 282 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 UBE2G1P62253 170 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 CST9LP1Q5W188 147 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 Q86TA4 180 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 ATP6V0E2Q8NHE4 81 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 PARLQ9H300 379 aa13.68□□□□□ -0.22
MCF2L-212ENST00000420013 ZNF345Q14585 488 aa13.67□□□□□ -0.22
MCF2L-212ENST00000420013 LGALSLQ3ZCW2 172 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-212ENST00000420013 FRZBQ92765 325 aa13.67□□□□□ -0.22
MCF2L-212ENST00000420013 VPS13BQ7Z7G8 4022 aa13.67□□□□□ -0.22
MCF2L-212ENST00000420013 LRCOL1A6NCL2 159 aa13.66□□□□□ -0.22
MCF2L-212ENST00000420013 HMSDA8MTL9 139 aa13.66□□□□□ -0.22
MCF2L-212ENST00000420013 B4DEV8 164 aa13.66□□□□□ -0.22
MCF2L-212ENST00000420013 LINC00694P0DN24 101 aa13.66□□□□□ -0.22
MCF2L-212ENST00000420013 CYTL1Q9NRR1 136 aa13.66□□□□□ -0.22
MCF2L-212ENST00000420013 IL36BQ9NZH7 164 aa13.66□□□□□ -0.22
MCF2L-212ENST00000420013 IGLV5-52A0A0A0MRZ9 124 aa13.65□□□□□ -0.22
MCF2L-212ENST00000420013 IGKV3D-20A0A0C4DH25 116 aa13.65□□□□□ -0.22
MCF2L-212ENST00000420013 KCNRGQ8N5I3 272 aa13.65□□□□□ -0.22
MCF2L-212ENST00000420013 FMC1Q96HJ9 113 aa13.65□□□□□ -0.22
MCF2L-212ENST00000420013 TMEM70Q9BUB7 260 aa13.65□□□□□ -0.22
MCF2L-212ENST00000420013 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
MCF2L-212ENST00000420013 M0R036 132 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 RHODO00212 210 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 DNLZQ5SXM8 178 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 Q5VSD8 79 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 SYT8Q8NBV8 401 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 TCEAL7Q9BRU2 100 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 Q9HAA7 133 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 FAT1Q14517 4588 aa13.64□□□□□ -0.23
MCF2L-212ENST00000420013 A0A0D9SG52 128 aa13.63□□□□□ -0.23
MCF2L-212ENST00000420013 KANTRA0A1W2PQU2 76 aa13.63□□□□□ -0.23
MCF2L-212ENST00000420013 COX8CQ7Z4L0 72 aa13.63□□□□□ -0.23
MCF2L-212ENST00000420013 Q8N814 137 aa13.63□□□□□ -0.23
MCF2L-212ENST00000420013 OR11H4Q8NGC9 324 aa13.63□□□□□ -0.23
MCF2L-212ENST00000420013 TM2D2Q9BX73 214 aa13.63□□□□□ -0.23
MCF2L-212ENST00000420013 A0A087WWC5 75 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 H3BVH4 76 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 IGHV3-30P01768 117 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 IGHV3-33P01772 117 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 IGHV3-30-3P0DP02 117 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 IGHV3-30-5P0DP03 117 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 AKR1C3P42330 323 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 FHITP49789 147 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 FAM162BQ5T6X4 162 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 SFT2D1Q8WV19 159 aa13.62□□□□□ -0.23
MCF2L-212ENST00000420013 ZNF471Q9BX82 626 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-212ENST00000420013 A0A1B0GV50 99 aa13.61□□□□□ -0.23
MCF2L-212ENST00000420013 UMAD1C9J7I0 102 aa13.61□□□□□ -0.23
MCF2L-212ENST00000420013 SH2D1AO60880 128 aa13.61□□□□□ -0.23
MCF2L-212ENST00000420013 TOR2AQ5JU69 321 aa13.61□□□□□ -0.23
MCF2L-212ENST00000420013 ZC2HC1AQ96GY0 325 aa13.61□□□□□ -0.23
MCF2L-212ENST00000420013 PFDN1O60925 122 aa13.6□□□□□ -0.23
MCF2L-212ENST00000420013 EIF5AP63241 154 aaKnown RBP13.6□□□□□ -0.23
MCF2L-212ENST00000420013 UFSP1Q6NVU6 142 aa13.6□□□□□ -0.23
MCF2L-212ENST00000420013 PHLDA3Q9Y5J5 127 aa13.6□□□□□ -0.23
MCF2L-212ENST00000420013 DMBT1Q9UGM3 2413 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-212ENST00000420013 TMSB15BA0A087X1C1 80 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms