RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 KIR3DS1Q14943 382 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 TWIST1Q15672 202 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 TDRG1Q3Y452 100 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 DNLZQ5SXM8 178 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 GATD1Q8NB37 220 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 OR10AG1Q8NH19 301 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 WFDC10AQ9H1F0 79 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 NACAE9PAV3 2078 aa4.39□□□□□ -1.71
HMGB3-202ENST00000419110 MUC4Q99102 2169 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 M0R381 172 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BKO60814 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 NXPH4O95158 308 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BJP06899 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 RPL35AP18077 110 aaKnown RBP4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BOP23527 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 SRIP30626 198 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BBP33778 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 APOC4P55056 127 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BDP58876 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BCP62807 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 SLAQ13239 276 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST2H2BEQ16778 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.38□□□□□ -1.71
HMGB3-202ENST00000419110 WFDC9Q8NEX5 89 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BHQ93079 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BNQ99877 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 HIST1H2BMQ99879 126 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 LINC00467Q9BRT7 94 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
HMGB3-202ENST00000419110 LOC102724200A0A096LPH7 203 aaPredicted RBP4.37□□□□□ -1.71
HMGB3-202ENST00000419110 IGHV3-16A0A0C4DH30 117 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 CRXO43186 299 aaPredicted RBP4.37□□□□□ -1.71
HMGB3-202ENST00000419110 ZNF324O75467 553 aaPredicted RBP4.37□□□□□ -1.71
HMGB3-202ENST00000419110 SMIM17P0DL12 118 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 ZNF493Q6ZR52 646 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 Q8N1Y9 231 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 DEFB125Q8N687 156 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 SPATA3Q8NHX4 192 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 TMEM263Q8WUH6 116 aaKnown RBP4.37□□□□□ -1.71
HMGB3-202ENST00000419110 C16orf74Q96GX8 76 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 C9orf85Q96MD7 179 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 LINC01587Q99440 93 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 C19orf73Q9NVV2 129 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 VWFP04275 2813 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 ANK2Q01484 3957 aa4.37□□□□□ -1.71
HMGB3-202ENST00000419110 COL6A5A8TX70 2615 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 IGHV3OR16-12A0A075B7B8 117 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 MUC21A0A0G2JKD1 596 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 MUC21A0A140T8X8 626 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 PHOX2AO14813 284 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 PPBPP02775 128 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 MGPP08493 103 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 RBMY1A1P0DJD3 496 aaKnown RBP4.36□□□□□ -1.71
HMGB3-202ENST00000419110 RBMY1CP0DJD4 496 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
HMGB3-202ENST00000419110 HTN1P15515 57 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 NTF3P20783 257 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 S100A2P29034 98 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 SSTP61278 116 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 RBMY1FQ15415 496 aaKnown RBP4.36□□□□□ -1.71
HMGB3-202ENST00000419110 OR10J3Q5JRS4 329 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 FAM104BQ5XKR9 115 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 Q6ZQT7 251 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 ORMDL3Q8N138 153 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 SPXQ9BT56 116 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 DPH3P1Q9H4G8 78 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 SCRT2Q9NQ03 307 aa4.36□□□□□ -1.71
HMGB3-202ENST00000419110 KIR2DL5BA0A0G2JN68 375 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 KIR2DL5BA0A0G2JPC4 375 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 D6R8Y8 96 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 M0R2P5 195 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 RHODO00212 210 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 GNRH2O43555 120 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 FRMD6-AS1P0C7T7 363 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 NDUFA6P56556 154 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 RIPPLY3P57055 190 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 ZNF56Q15929 161 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 RRN3P1Q2M238 152 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 AMN1Q8IY45 258 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 KIR2DL5AQ8N109 375 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 KIR2DL5BQ8NHK3 375 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 MRAP2Q96G30 205 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 RCHY1Q96PM5 261 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 NDUFAF3Q9BU61 184 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 CSTL1Q9H114 145 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 LAMTOR2Q9Y2Q5 125 aa4.35□□□□□ -1.71
HMGB3-202ENST00000419110 A8MWV9 139 aa4.34□□□□□ -1.71
HMGB3-202ENST00000419110 UBE2CO00762 179 aa4.34□□□□□ -1.71
HMGB3-202ENST00000419110 NCR2O95944 276 aa4.34□□□□□ -1.71
HMGB3-202ENST00000419110 PPP1R17O96001 155 aa4.34□□□□□ -1.71
HMGB3-202ENST00000419110 CKS2P33552 79 aa4.34□□□□□ -1.71
HMGB3-202ENST00000419110 EGFEM1PQ0D2K5 195 aa4.34□□□□□ -1.71
HMGB3-202ENST00000419110 MRPL51Q4U2R6 128 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms