RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CLPSL1A2RUU4 121 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 TRACP01848 142 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 ZNF491Q8N8L2 437 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 C20orf78Q9BR46 151 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 J3QQQ9 107 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 K7EQD1 137 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 ATP6V0E2Q8NHE4 81 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 COX7A2LO14548 114 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 HHLA3Q9XRX5 114 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 ATP5G1P05496 136 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 CFPP27918 469 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 Q0VG73 95 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
PTCH1-205ENST00000418258 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
PTCH1-205ENST00000418258 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
PTCH1-205ENST00000418258 IGHV4-28A0A0C4DH34 117 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 AMTNQ6UX39 209 aa8.8□□□□□ -1
PTCH1-205ENST00000418258 UBE2V1Q13404 147 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 ARTNQ5T4W7 220 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 CEND1Q8N111 149 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 MRPL36Q9P0J6 103 aaKnown RBP8.79□□□□□ -1
PTCH1-205ENST00000418258 Q9H8V8 135 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 RNF152Q8N8N0 203 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 CTSZQ9UBR2 303 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 FHL1Q13642 323 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 UTF1Q5T230 341 aa8.79□□□□□ -1
PTCH1-205ENST00000418258 NPYP01303 97 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 FUSP35637 526 aaKnown RBP eCLIP8.78□□□□□ -1
PTCH1-205ENST00000418258 DEFB135Q30KP9 77 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 IGLL5B9A064 214 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 DEFB4AO15263 64 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 WT1P19544 449 aaPredicted RBP8.78□□□□□ -1
PTCH1-205ENST00000418258 IGHV4OR15-8A0A075B7B6 117 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 A0A087WW49 117 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 TM2D2Q9BX73 214 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 SMAD5-AS1Q9Y6J3 95 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 V9GYV3 84 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 EXPH5Q8NEV8 1989 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 TRAV4A0A0B4J268 109 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 AJUBAQ96IF1 538 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 CARD19Q96LW7 228 aa8.78□□□□□ -1
PTCH1-205ENST00000418258 RBAKDNA6NC62 111 aa8.77□□□□□ -1
PTCH1-205ENST00000418258 CHKB-CPT1BH3BT56 60 aa8.77□□□□□ -1
PTCH1-205ENST00000418258 BVES-AS1Q5T3Y7 98 aa8.77□□□□□ -1
PTCH1-205ENST00000418258 SEM1Q6ZVN7 128 aa8.77□□□□□ -1
PTCH1-205ENST00000418258 SPRY2O43597 315 aa8.77□□□□□ -1.01
PTCH1-205ENST00000418258 SPRNQ5BIV9 151 aa8.77□□□□□ -1.01
PTCH1-205ENST00000418258 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1.01
PTCH1-205ENST00000418258 ORMDL1Q9P0S3 153 aa8.77□□□□□ -1.01
PTCH1-205ENST00000418258 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
PTCH1-205ENST00000418258 ETV2O00321 342 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-205ENST00000418258 ZFP36P26651 326 aaKnown RBP8.77□□□□□ -1.01
PTCH1-205ENST00000418258 ZNF493Q6ZR52 646 aa8.77□□□□□ -1.01
PTCH1-205ENST00000418258 ZNF124Q15973 351 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 LGALS9BQ3B8N2 356 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 LGALS9CQ6DKI2 356 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 HERV-K104P63124 156 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 ADORA2A-AS1P86434 159 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 Q6ZWC4 215 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 C8orf31Q8N9H6 132 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 HIST2H2BCQ6DN03 193 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 C9orf47Q6ZRZ4 202 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 C5orf56Q8N8D9 126 aa8.76□□□□□ -1.01
PTCH1-205ENST00000418258 WIPF3A6NGB9 483 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 C10orf105Q8TEF2 133 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 ATG2AQ2TAZ0 1938 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 RAI1Q7Z5J4 1906 aaPredicted RBP8.75□□□□□ -1.01
PTCH1-205ENST00000418258 IGHV7-81A0A0B4J1V7 117 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 NPBQ8NG41 125 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 C9orf118A6NHY6 69 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 LTAP01374 205 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 FAM231DQ6ZW35 169 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 DLEU1O43261 78 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 RITA1Q96K30 269 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 AGPAT4-IT1Q9H0P7 198 aa8.75□□□□□ -1.01
PTCH1-205ENST00000418258 C2orf70A6NJV1 201 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 RS1O15537 224 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 PYY3Q5JQD4 70 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 C4orf3Q8WVX3 66 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 RPL39LQ96EH5 51 aaKnown RBP8.74□□□□□ -1.01
PTCH1-205ENST00000418258 NDUFB1O75438 58 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 ZNF524Q96C55 264 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 SPANXA1Q9NS26 97 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 K7ERJ3 54 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 COX8AP10176 69 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 COX7B2Q8TF08 81 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 DKK2Q9UBU2 259 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 RSPO1Q2MKA7 263 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-205ENST00000418258 IL17DQ8TAD2 202 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 LENEPQ9Y5L5 61 aa8.74□□□□□ -1.01
PTCH1-205ENST00000418258 POLR3KQ9Y2Y1 108 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-205ENST00000418258 PRRC2AP48634 2157 aaKnown RBP8.73□□□□□ -1.01
PTCH1-205ENST00000418258 RNF138Q8WVD3 245 aa8.73□□□□□ -1.01
PTCH1-205ENST00000418258 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
PTCH1-205ENST00000418258 F8W1H4 67 aa8.73□□□□□ -1.01
PTCH1-205ENST00000418258 K7EMI3 77 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms