RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NUTF2P61970 127 aaKnown RBP9.66□□□□□ -0.86
HLA-DMB-258ENST00000418107 TWIST1Q15672 202 aa9.66□□□□□ -0.86
HLA-DMB-258ENST00000418107 A0A1B0GXF2 115 aa9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 RBMY1BA6NDE4 496 aaKnown RBP9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 RBMY1EA6NEQ0 496 aaKnown RBP9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 H3BVH4 76 aa9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 GNRH2O43555 120 aa9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 AMBPP02760 352 aa9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 RBMY1DP0C7P1 496 aaKnown RBP9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 CTRLP40313 264 aa9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 NDUFA6P56556 154 aa9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 SSBP4Q9BWG4 385 aaPredicted RBP9.65□□□□□ -0.86
HLA-DMB-258ENST00000418107 IGHV1OR15-1A0A075B7D0 117 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BKO60814 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 ZNF324O75467 553 aaPredicted RBP9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 INSP01308 110 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BJP06899 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BOP23527 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BBP33778 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BDP58876 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BCP62807 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST2H2BEQ16778 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 KIAA1644Q3SXP7 199 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 SMIM15Q7Z3B0 74 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BHQ93079 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BNQ99877 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HIST1H2BMQ99879 126 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
HLA-DMB-258ENST00000418107 HTN1P15515 57 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 NTF3P20783 257 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 CACNG7P62955 275 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 TRPT1Q86TN4 253 aaKnown RBP9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 TMEM208Q9BTX3 173 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 XCL2Q9UBD3 114 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 TRGV11A0A075B6L2 103 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 CBY3A6NI87 242 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 LINC01587Q99440 93 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 EDA2RQ9HAV5 297 aa9.63□□□□□ -0.87
HLA-DMB-258ENST00000418107 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 PHOX2AO14813 284 aa9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 SNRPEP62304 92 aaKnown RBP9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 SLAQ13239 276 aa9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 ZNF575Q86XF7 245 aa9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 DEFB125Q8N687 156 aa9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 OR10AG1Q8NH19 301 aa9.62□□□□□ -0.87
HLA-DMB-258ENST00000418107 CRXO43186 299 aaPredicted RBP9.61□□□□□ -0.87
HLA-DMB-258ENST00000418107 SNAI2O43623 268 aa9.61□□□□□ -0.87
HLA-DMB-258ENST00000418107 MED14OSP0DP75 135 aa9.61□□□□□ -0.87
HLA-DMB-258ENST00000418107 TDRG1Q3Y452 100 aa9.61□□□□□ -0.87
HLA-DMB-258ENST00000418107 C20orf144Q9BQM9 153 aa9.61□□□□□ -0.87
HLA-DMB-258ENST00000418107 C19orf73Q9NVV2 129 aa9.61□□□□□ -0.87
HLA-DMB-258ENST00000418107 IGHV3OR16-12A0A075B7B8 117 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 M0R381 172 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 IGHV4-30-4P0DP06 118 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 SRIP30626 198 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 Q8N1Y9 231 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 C1QTNF4Q9BXJ3 329 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 TP53TG3Q9ULZ0 132 aa9.6□□□□□ -0.87
HLA-DMB-258ENST00000418107 MUC4Q99102 2169 aa9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 LOC102724200A0A096LPH7 203 aaPredicted RBP9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 IGHV3-16A0A0C4DH30 117 aa9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 SPRY2O43597 315 aa9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 RNASE3P12724 160 aaKnown RBP9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 MORN3Q6PF18 240 aaPredicted RBP9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 ZNF493Q6ZR52 646 aa9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 BAGE3Q86Y29 109 aa9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 GOLT1BQ9Y3E0 138 aa9.59□□□□□ -0.87
HLA-DMB-258ENST00000418107 RBMY1A1P0DJD3 496 aaKnown RBP9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 RBMY1CP0DJD4 496 aa9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 RBMY1FQ15415 496 aaKnown RBP9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 FAM104BQ5XKR9 115 aa9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 TMEM256Q8N2U0 113 aa9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 GATD1Q8NB37 220 aa9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 SYT8Q8NBV8 401 aa9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 MDFICQ9P1T7 246 aa9.58□□□□□ -0.88
HLA-DMB-258ENST00000418107 ZNF415Q09FC8 603 aa9.57□□□□□ -0.88
HLA-DMB-258ENST00000418107 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
HLA-DMB-258ENST00000418107 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
HLA-DMB-258ENST00000418107 IGHV4-4A0A075B6R2 117 aa9.56□□□□□ -0.88
HLA-DMB-258ENST00000418107 C5orf52A6NGY3 159 aa9.56□□□□□ -0.88
HLA-DMB-258ENST00000418107 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
HLA-DMB-258ENST00000418107 S100A2P29034 98 aa9.56□□□□□ -0.88
HLA-DMB-258ENST00000418107 SPATA25Q9BR10 227 aa9.56□□□□□ -0.88
HLA-DMB-258ENST00000418107 LOC105371267A0A1B0GV96 52 aa9.55□□□□□ -0.88
HLA-DMB-258ENST00000418107 A8MZ25 164 aa9.55□□□□□ -0.88
HLA-DMB-258ENST00000418107 HOXA5P20719 270 aa9.55□□□□□ -0.88
HLA-DMB-258ENST00000418107 EVI2AP22794 236 aa9.55□□□□□ -0.88
HLA-DMB-258ENST00000418107 CKS2P33552 79 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms