RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RHOHQ15669 191 aa9.37□□□□□ -0.91
UBR4-205ENST00000417040 CGB3P0DN86 165 aa9.36□□□□□ -0.91
UBR4-205ENST00000417040 TEN1Q86WV5 123 aa9.36□□□□□ -0.91
UBR4-205ENST00000417040 SPATA25Q9BR10 227 aa9.36□□□□□ -0.91
UBR4-205ENST00000417040 ESM1Q9NQ30 184 aa9.36□□□□□ -0.91
UBR4-205ENST00000417040 FAM215AQ9Y5M1 114 aa9.36□□□□□ -0.91
UBR4-205ENST00000417040 SLURP1P55000 103 aa9.36□□□□□ -0.91
UBR4-205ENST00000417040 FAM167A-AS1Q96KT0 104 aa9.36□□□□□ -0.91
UBR4-205ENST00000417040 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
UBR4-205ENST00000417040 LGALS9O00182 355 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 POU2AF1Q16633 256 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 SP5Q6BEB4 398 aaPredicted RBP9.35□□□□□ -0.91
UBR4-205ENST00000417040 RNF183Q96D59 192 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 WFDC9Q8NEX5 89 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 K7EIM0 57 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 Q9HAA7 133 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 IGKV2D-24A0A075B6R9 120 aa9.35□□□□□ -0.91
UBR4-205ENST00000417040 AHCTF1Q8WYP5 2266 aa9.34□□□□□ -0.91
UBR4-205ENST00000417040 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
UBR4-205ENST00000417040 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
UBR4-205ENST00000417040 MRPL36Q9P0J6 103 aaKnown RBP9.34□□□□□ -0.91
UBR4-205ENST00000417040 CEP250Q9BV73 2442 aa9.34□□□□□ -0.91
UBR4-205ENST00000417040 IGHV4-59P01825 116 aa9.34□□□□□ -0.91
UBR4-205ENST00000417040 PSMB8P28062 276 aa9.34□□□□□ -0.91
UBR4-205ENST00000417040 ACYP1P07311 99 aa9.33□□□□□ -0.92
UBR4-205ENST00000417040 SPANXDQ9BXN6 97 aa9.33□□□□□ -0.92
UBR4-205ENST00000417040 TCL1BO95988 128 aa9.33□□□□□ -0.92
UBR4-205ENST00000417040 EML6Q6ZMW3 1958 aa9.33□□□□□ -0.92
UBR4-205ENST00000417040 PLXNB3Q9ULL4 1909 aa9.33□□□□□ -0.92
UBR4-205ENST00000417040 MT-ATP8P03928 68 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 Q8NFD4 153 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 OBSL1O75147 1896 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 ANAPC1Q9H1A4 1944 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 UBE2BP63146 152 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 CEMP1Q6PRD7 247 aaPredicted RBP9.32□□□□□ -0.92
UBR4-205ENST00000417040 NPBQ8NG41 125 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 C11orf86A6NJI1 115 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 LHBP01229 141 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 ODF1Q14990 250 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 DEFB112Q30KQ8 113 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 IGHV3-30P01768 117 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 IGHV3-33P01772 117 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 IGHV3-30-3P0DP02 117 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 IGHV3-30-5P0DP03 117 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 KRTAP27-1Q3LI81 207 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 HIST2H2BCQ6DN03 193 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 J3KT08 172 aa9.32□□□□□ -0.92
UBR4-205ENST00000417040 CRYGBP07316 175 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 IGHV7-81A0A0B4J1V7 117 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 BUB3O43684 328 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 IGKV1-17P01599 117 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 Q8N1Y9 231 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 K7EQD1 137 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 NFE4Q86UQ8 179 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 CTSGP08311 255 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 IGHV4-38-2P0DP08 117 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 HERV-K104P63124 156 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 AJUBAQ96IF1 538 aa9.31□□□□□ -0.92
UBR4-205ENST00000417040 POLEQ07864 2286 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 CEP290O15078 2479 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 CGB7P0DN87 165 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 LECT2O14960 151 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 SRSF2Q01130 221 aaKnown RBP9.3□□□□□ -0.92
UBR4-205ENST00000417040 LINC00322Q6ZN03 302 aaPredicted RBP9.3□□□□□ -0.92
UBR4-205ENST00000417040 NCKAP5O14513 1909 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 ATOX1O00244 68 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 WFDC11Q8NEX6 87 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 E9PLD3 99 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 LYPD6Q86Y78 171 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 BRK1Q8WUW1 75 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 HIGD1BQ9P298 99 aa9.3□□□□□ -0.92
UBR4-205ENST00000417040 IGLV11-55A0A075B6I3 123 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 GYPEP15421 78 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 BLCAPP62952 87 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 C14orf132Q9NPU4 83 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 ARFGEF3Q5TH69 2177 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 WI2-2373I1.2A0A1W2PRP0 233 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 C2orf70A6NJV1 201 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 ZNF503Q96F45 646 aa9.29□□□□□ -0.92
UBR4-205ENST00000417040 APOC4P55056 127 aa9.28□□□□□ -0.92
UBR4-205ENST00000417040 K7ENP7 123 aa9.28□□□□□ -0.92
UBR4-205ENST00000417040 C11orf1Q9H5F2 150 aa9.28□□□□□ -0.92
UBR4-205ENST00000417040 TEX22C9J3V5 150 aa9.28□□□□□ -0.92
UBR4-205ENST00000417040 C16orf54Q6UWD8 224 aa9.28□□□□□ -0.92
UBR4-205ENST00000417040 NDUFA11Q86Y39 141 aa9.28□□□□□ -0.92
UBR4-205ENST00000417040 P0DMU3 169 aa9.27□□□□□ -0.92
UBR4-205ENST00000417040 FAM231AP0DMU4 169 aa9.27□□□□□ -0.92
UBR4-205ENST00000417040 FAM231CP0DMU5 169 aa9.27□□□□□ -0.92
UBR4-205ENST00000417040 CENPVL3A0A0U1RRI6 287 aa9.27□□□□□ -0.92
UBR4-205ENST00000417040 KAAG1Q9UBP8 84 aa9.27□□□□□ -0.92
UBR4-205ENST00000417040 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
UBR4-205ENST00000417040 GATA3P23771 443 aa9.27□□□□□ -0.93
UBR4-205ENST00000417040 Q6ZUT4 128 aa9.27□□□□□ -0.93
UBR4-205ENST00000417040 TEX49A0A1B0GTD5 131 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms