RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RNASE3P12724 160 aaKnown RBP11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 ZNF506Q5JVG8 444 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 AKR1C8PQ5T2L2 129 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 SCRT2Q9NQ03 307 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 DNAH5Q8TE73 4624 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 IGHV3-73A0A0B4J1V6 119 aa11.88□□□□□ -0.51
PDLIM2-208ENST00000416159 TRAV8-6A0A0B4J262 113 aa11.88□□□□□ -0.51
PDLIM2-208ENST00000416159 LINC00479Q96M42 142 aa11.88□□□□□ -0.51
PDLIM2-208ENST00000416159 ARL2-SNX15V9GYD0 113 aa11.88□□□□□ -0.51
PDLIM2-208ENST00000416159 MGST1P10620 155 aaKnown RBP11.87□□□□□ -0.51
PDLIM2-208ENST00000416159 S100A4P26447 101 aaKnown RBP11.87□□□□□ -0.51
PDLIM2-208ENST00000416159 UBE2G2P60604 165 aa11.87□□□□□ -0.51
PDLIM2-208ENST00000416159 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
PDLIM2-208ENST00000416159 HIST1H2BAQ96A08 127 aa11.87□□□□□ -0.51
PDLIM2-208ENST00000416159 IGKV3D-20A0A0C4DH25 116 aa11.86□□□□□ -0.51
PDLIM2-208ENST00000416159 FAM74A7A6NL05 159 aa11.86□□□□□ -0.51
PDLIM2-208ENST00000416159 PEX7O00628 323 aa11.86□□□□□ -0.51
PDLIM2-208ENST00000416159 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
PDLIM2-208ENST00000416159 OR10J3Q5JRS4 329 aa11.86□□□□□ -0.51
PDLIM2-208ENST00000416159 PIK3CD-AS1Q5SR53 167 aa11.86□□□□□ -0.51
PDLIM2-208ENST00000416159 APOBP04114 4563 aaKnown RBP11.86□□□□□ -0.51
PDLIM2-208ENST00000416159 A8MWV9 139 aa11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 ASIPP42127 132 aa11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 RGS21Q2M5E4 152 aa11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 LELP1Q5T871 98 aa11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 ZFP2Q6ZN57 461 aa11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 ATP6V0E2Q8NHE4 81 aa11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
PDLIM2-208ENST00000416159 IBA57-AS1B1ANH7 110 aa11.84□□□□□ -0.51
PDLIM2-208ENST00000416159 G3V3Q6 166 aa11.84□□□□□ -0.51
PDLIM2-208ENST00000416159 LGALSLQ3ZCW2 172 aaPredicted RBP11.84□□□□□ -0.51
PDLIM2-208ENST00000416159 Q86TA4 180 aa11.84□□□□□ -0.51
PDLIM2-208ENST00000416159 PARLQ9H300 379 aa11.84□□□□□ -0.51
PDLIM2-208ENST00000416159 CYTL1Q9NRR1 136 aa11.84□□□□□ -0.51
PDLIM2-208ENST00000416159 ZFP30Q9Y2G7 519 aa11.84□□□□□ -0.51
PDLIM2-208ENST00000416159 MAP1LC3B2A6NCE7 125 aa11.83□□□□□ -0.52
PDLIM2-208ENST00000416159 ARPC5O15511 151 aa11.83□□□□□ -0.52
PDLIM2-208ENST00000416159 PSCAO43653 123 aa11.83□□□□□ -0.52
PDLIM2-208ENST00000416159 MAP1LC3BQ9GZQ8 125 aa11.83□□□□□ -0.52
PDLIM2-208ENST00000416159 IL36BQ9NZH7 164 aa11.83□□□□□ -0.52
PDLIM2-208ENST00000416159 B4DEV8 164 aa11.82□□□□□ -0.52
PDLIM2-208ENST00000416159 DNLZQ5SXM8 178 aa11.82□□□□□ -0.52
PDLIM2-208ENST00000416159 COX8CQ7Z4L0 72 aa11.82□□□□□ -0.52
PDLIM2-208ENST00000416159 STOML3Q8TAV4 291 aa11.82□□□□□ -0.52
PDLIM2-208ENST00000416159 FMC1Q96HJ9 113 aa11.82□□□□□ -0.52
PDLIM2-208ENST00000416159 FHITP49789 147 aa11.81□□□□□ -0.52
PDLIM2-208ENST00000416159 CRIP1P50238 77 aa11.81□□□□□ -0.52
PDLIM2-208ENST00000416159 UBE2G1P62253 170 aa11.81□□□□□ -0.52
PDLIM2-208ENST00000416159 Q6ZSN1 163 aa11.81□□□□□ -0.52
PDLIM2-208ENST00000416159 ZC2HC1AQ96GY0 325 aa11.81□□□□□ -0.52
PDLIM2-208ENST00000416159 TCEAL7Q9BRU2 100 aa11.81□□□□□ -0.52
PDLIM2-208ENST00000416159 TRBV6-1A0A0K0K1D8 114 aa11.8□□□□□ -0.52
PDLIM2-208ENST00000416159 KRBOX1C9JBD0 128 aa11.8□□□□□ -0.52
PDLIM2-208ENST00000416159 IGHV3-30P01768 117 aa11.8□□□□□ -0.52
PDLIM2-208ENST00000416159 IGHV3-33P01772 117 aa11.8□□□□□ -0.52
PDLIM2-208ENST00000416159 IGHV3-30-3P0DP02 117 aa11.8□□□□□ -0.52
PDLIM2-208ENST00000416159 IGHV3-30-5P0DP03 117 aa11.8□□□□□ -0.52
PDLIM2-208ENST00000416159 SYT8Q8NBV8 401 aa11.8□□□□□ -0.52
PDLIM2-208ENST00000416159 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 H3BVH4 76 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 SH2D1AO60880 128 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 GCSHP23434 173 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 XGP55808 180 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 KRTAP10-1P60331 282 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 GAGE1Q13065 139 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 GAGE4Q13068 117 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 GAGE5Q13069 117 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 FAM162BQ5T6X4 162 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 UFSP1Q6NVU6 142 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 JPT2Q9H910 190 aa11.79□□□□□ -0.52
PDLIM2-208ENST00000416159 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
PDLIM2-208ENST00000416159 M0R036 132 aa11.78□□□□□ -0.52
PDLIM2-208ENST00000416159 RHODO00212 210 aa11.78□□□□□ -0.52
PDLIM2-208ENST00000416159 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
PDLIM2-208ENST00000416159 ZNF674Q2M3X9 581 aa11.78□□□□□ -0.52
PDLIM2-208ENST00000416159 OR11H4Q8NGC9 324 aa11.78□□□□□ -0.52
PDLIM2-208ENST00000416159 Q9HAA7 133 aa11.78□□□□□ -0.52
PDLIM2-208ENST00000416159 GRIFINA4D1Z8 144 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 EPM2AB3EWF7 344 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 LTAP01374 205 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 AKR1C3P42330 323 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 ZNF345Q14585 488 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 LAGE3Q14657 143 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 KCNRGQ8N5I3 272 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 SAMD10Q9BYL1 202 aa11.77□□□□□ -0.53
PDLIM2-208ENST00000416159 A0A087WWC5 75 aa11.76□□□□□ -0.53
PDLIM2-208ENST00000416159 SMLR1H3BR10 107 aa11.76□□□□□ -0.53
PDLIM2-208ENST00000416159 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
PDLIM2-208ENST00000416159 TPT1P13693 172 aaKnown RBP11.76□□□□□ -0.53
PDLIM2-208ENST00000416159 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
PDLIM2-208ENST00000416159 TM2D2Q9BX73 214 aa11.76□□□□□ -0.53
PDLIM2-208ENST00000416159 PHLDA3Q9Y5J5 127 aa11.76□□□□□ -0.53
PDLIM2-208ENST00000416159 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
PDLIM2-208ENST00000416159 UMAD1C9J7I0 102 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms