RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 APOC3P02656 99 aa11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 PRM2P04554 102 aa11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 TYMSP04818 313 aa11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 HTN1P15515 57 aa11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 RPS20P60866 119 aaKnown RBP11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
CDC42EP1-202ENST00000415670 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 GNRH2O43555 120 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 AZU1P20160 251 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 CT83Q5H943 113 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 DNLZQ5SXM8 178 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 SVBPQ8N300 66 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 CLRN3Q8NCR9 226 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 V9GYV3 84 aa11.83□□□□□ -0.52
CDC42EP1-202ENST00000415670 TMSB15BA0A087X1C1 80 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 PPP1R2P9O14990 202 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 MT-ND4LP03901 98 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 MIFP14174 115 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 RNF212Q495C1 297 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 LINC00336Q6ZUF6 198 aa11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 RNASE8Q8TDE3 154 aaKnown RBP11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 TMEM263Q8WUH6 116 aaKnown RBP11.82□□□□□ -0.52
CDC42EP1-202ENST00000415670 IGHV3-16A0A0C4DH30 117 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 A8MWL6 223 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 ASIPP42127 132 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 RHEBQ15382 184 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 C11orf72Q8NBR9 251 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
CDC42EP1-202ENST00000415670 C7orf77A4D0Y5 90 aa11.8□□□□□ -0.52
CDC42EP1-202ENST00000415670 SNAPINO95295 136 aa11.8□□□□□ -0.52
CDC42EP1-202ENST00000415670 ZNF415Q09FC8 603 aa11.8□□□□□ -0.52
CDC42EP1-202ENST00000415670 Q8NAQ8 132 aa11.8□□□□□ -0.52
CDC42EP1-202ENST00000415670 C11orf68Q9H3H3 251 aaKnown RBP11.8□□□□□ -0.52
CDC42EP1-202ENST00000415670 MDFICQ9P1T7 246 aa11.8□□□□□ -0.52
CDC42EP1-202ENST00000415670 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 PLAC8L1A1L4L8 177 aa11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 GZMBP10144 247 aa11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 RNASE3P12724 160 aaKnown RBP11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 TCL1AP56279 114 aa11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 CTDSP1Q9GZU7 261 aa11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
CDC42EP1-202ENST00000415670 IGHV4-4A0A075B6R2 117 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 A0A087WWC5 75 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 ATP6V1G1O75348 118 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 IGLC6P0CF74 106 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 Q6ZTC4 211 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 TSKUQ8WUA8 353 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 C9orf85Q96MD7 179 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 GFRA4Q9GZZ7 299 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
CDC42EP1-202ENST00000415670 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
CDC42EP1-202ENST00000415670 H3BVH4 76 aa11.77□□□□□ -0.53
CDC42EP1-202ENST00000415670 ARMS2P0C7Q2 107 aa11.77□□□□□ -0.53
CDC42EP1-202ENST00000415670 FER1L6-AS1Q8NA97 138 aa11.77□□□□□ -0.53
CDC42EP1-202ENST00000415670 SCRT2Q9NQ03 307 aa11.77□□□□□ -0.53
CDC42EP1-202ENST00000415670 A0A1W2PPQ1 181 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 SMIM27A0A1W2PRY6 76 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 SNURFLB1AK76 121 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 SNAI2O43623 268 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 OR5AL1P0C617 328 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 FOXA3P55318 350 aaPredicted RBP11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 DAZ2Q13117 558 aaKnown RBP11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 SPXQ9BT56 116 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 SSBP4Q9BWG4 385 aaPredicted RBP11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 RPS10P5Q9NQ39 176 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 TMEM242Q9NWH2 141 aa11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
CDC42EP1-202ENST00000415670 S100A1P23297 94 aa11.75□□□□□ -0.53
CDC42EP1-202ENST00000415670 TCTAP57738 103 aa11.75□□□□□ -0.53
CDC42EP1-202ENST00000415670 HERC1Q15751 4861 aa11.75□□□□□ -0.53
CDC42EP1-202ENST00000415670 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
CDC42EP1-202ENST00000415670 F2Z2F3 143 aa11.74□□□□□ -0.53
CDC42EP1-202ENST00000415670 CTRLP40313 264 aa11.74□□□□□ -0.53
CDC42EP1-202ENST00000415670 EMP1P54849 157 aa11.74□□□□□ -0.53
CDC42EP1-202ENST00000415670 ATRAIDQ6UW56 229 aa11.74□□□□□ -0.53
CDC42EP1-202ENST00000415670 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
CDC42EP1-202ENST00000415670 CELA1Q9UNI1 258 aa11.74□□□□□ -0.53
CDC42EP1-202ENST00000415670 HIGD1CA8MV81 97 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 M0R2P5 195 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 LYZL1Q6UWQ5 148 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 PTH2Q96A98 100 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 IMMP2LQ96T52 175 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 TPPP3Q9BW30 176 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 NAT8BQ9UHF3 227 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 PHLDA3Q9Y5J5 127 aa11.73□□□□□ -0.53
CDC42EP1-202ENST00000415670 SPINK4O60575 86 aa11.72□□□□□ -0.53
CDC42EP1-202ENST00000415670 LGALS9BQ3B8N2 356 aa11.72□□□□□ -0.53
CDC42EP1-202ENST00000415670 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
CDC42EP1-202ENST00000415670 POM121L12Q8N7R1 296 aa11.72□□□□□ -0.53
CDC42EP1-202ENST00000415670 NUP35Q8NFH5 326 aa11.72□□□□□ -0.53
CDC42EP1-202ENST00000415670 OR10AG1Q8NH19 301 aa11.72□□□□□ -0.53
CDC42EP1-202ENST00000415670 PGLYRP4Q96LB8 373 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms