RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
HMGA1P1-201ENST00000415560 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
HMGA1P1-201ENST00000415560 TP53TG3Q9ULZ0 132 aa10.41□□□□□ -0.74
HMGA1P1-201ENST00000415560 TMA7Q9Y2S6 64 aaKnown RBP10.41□□□□□ -0.74
HMGA1P1-201ENST00000415560 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.74
HMGA1P1-201ENST00000415560 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.74
HMGA1P1-201ENST00000415560 UBE2CO00762 179 aa10.4□□□□□ -0.74
HMGA1P1-201ENST00000415560 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.74
HMGA1P1-201ENST00000415560 C9orf85Q96MD7 179 aa10.4□□□□□ -0.74
HMGA1P1-201ENST00000415560 SPXQ9BT56 116 aa10.4□□□□□ -0.74
HMGA1P1-201ENST00000415560 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
HMGA1P1-201ENST00000415560 M0R381 172 aa10.39□□□□□ -0.75
HMGA1P1-201ENST00000415560 KRTAP10-11P60412 298 aa10.39□□□□□ -0.75
HMGA1P1-201ENST00000415560 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
HMGA1P1-201ENST00000415560 OR10AG1Q8NH19 301 aa10.39□□□□□ -0.75
HMGA1P1-201ENST00000415560 MDFICQ9P1T7 246 aa10.39□□□□□ -0.75
HMGA1P1-201ENST00000415560 G3V4G9 280 aa10.38□□□□□ -0.75
HMGA1P1-201ENST00000415560 S100A6P06703 90 aa10.38□□□□□ -0.75
HMGA1P1-201ENST00000415560 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
HMGA1P1-201ENST00000415560 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
HMGA1P1-201ENST00000415560 IGHV4-30-4P0DP06 118 aa10.38□□□□□ -0.75
HMGA1P1-201ENST00000415560 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
HMGA1P1-201ENST00000415560 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
HMGA1P1-201ENST00000415560 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
HMGA1P1-201ENST00000415560 A8MZ25 164 aa10.37□□□□□ -0.75
HMGA1P1-201ENST00000415560 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
HMGA1P1-201ENST00000415560 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
HMGA1P1-201ENST00000415560 PTH2Q96A98 100 aa10.37□□□□□ -0.75
HMGA1P1-201ENST00000415560 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
HMGA1P1-201ENST00000415560 MSRB1Q9NZV6 116 aa10.37□□□□□ -0.75
HMGA1P1-201ENST00000415560 M0R2P5 195 aa10.36□□□□□ -0.75
HMGA1P1-201ENST00000415560 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
HMGA1P1-201ENST00000415560 ZNF705AQ6ZN79 300 aaPredicted RBP10.36□□□□□ -0.75
HMGA1P1-201ENST00000415560 TMEM263Q8WUH6 116 aaKnown RBP10.36□□□□□ -0.75
HMGA1P1-201ENST00000415560 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
HMGA1P1-201ENST00000415560 PHOX2AO14813 284 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 NXPH4O95158 308 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 SLAQ13239 276 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 ZNF876PQ49A33 203 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 DMRTA1Q5VZB9 504 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 GSN-AS1Q9NRJ2 163 aa10.35□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BKO60814 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 PPBPP02775 128 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BJP06899 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 AZU1P20160 251 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BOP23527 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BBP33778 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BDP58876 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BCP62807 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST2H2BEQ16778 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BHQ93079 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BNQ99877 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 HIST1H2BMQ99879 126 aa10.34□□□□□ -0.75
HMGA1P1-201ENST00000415560 RAB4AP20338 218 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 EVI2AP22794 236 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 SRIP30626 198 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 CKS2P33552 79 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 NDUFA6P56556 154 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 KRTAP21-3Q3LHN1 58 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 Q6ZWC4 215 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 C11orf72Q8NBR9 251 aa10.33□□□□□ -0.76
HMGA1P1-201ENST00000415560 A8MWV9 139 aa10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 SPRY2O43597 315 aa10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 PRM2P04554 102 aa10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 ORMDL3Q8N138 153 aa10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 C14orf178Q8N769 122 aaPredicted RBP10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 RNASE8Q8TDE3 154 aaKnown RBP10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 ALKBH7Q9BT30 221 aaPredicted RBP10.32□□□□□ -0.76
HMGA1P1-201ENST00000415560 Q0VG73 95 aa10.31□□□□□ -0.76
HMGA1P1-201ENST00000415560 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
HMGA1P1-201ENST00000415560 LGALS9BQ3B8N2 356 aa10.31□□□□□ -0.76
HMGA1P1-201ENST00000415560 OR10J3Q5JRS4 329 aa10.31□□□□□ -0.76
HMGA1P1-201ENST00000415560 MRAP2Q96G30 205 aa10.31□□□□□ -0.76
HMGA1P1-201ENST00000415560 MUC4Q99102 2169 aa10.31□□□□□ -0.76
HMGA1P1-201ENST00000415560 PPP1R17O96001 155 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 DEFB135Q30KP9 77 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 BAGE3Q86Y29 109 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 RASL10AQ92737 203 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 RNF183Q96D59 192 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 PRELID3AQ96N28 172 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 LAMTOR2Q9Y2Q5 125 aa10.3□□□□□ -0.76
HMGA1P1-201ENST00000415560 COL6A5A8TX70 2615 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 D6R8Y8 96 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 F5H697 171 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 MGPP08493 103 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 KPRPQ5T749 579 aaPredicted RBP10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 OR11H2Q8NH07 326 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 OVOL2Q9BRP0 275 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 U3KQK5 164 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 STAB1Q9NY15 2570 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 NOTCH3Q9UM47 2321 aa10.29□□□□□ -0.76
HMGA1P1-201ENST00000415560 TRGV1A0A0A0MS02 117 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 RHODO00212 210 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms