RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 KRTAP1-5Q9BYS1 174 aa6.62□□□□□ -1.35
LINC01090-201ENST00000415357 PRO0255Q9UI72 69 aa6.62□□□□□ -1.35
LINC01090-201ENST00000415357 ARL2-SNX15V9GYD0 113 aa6.62□□□□□ -1.35
LINC01090-201ENST00000415357 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
LINC01090-201ENST00000415357 A0A0D9SG52 128 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 M0R2P5 195 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 PFN1P07737 140 aaKnown RBP6.61□□□□□ -1.35
LINC01090-201ENST00000415357 TMUB2Q71RG4 321 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 RASL10AQ92737 203 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 KCNS1Q96KK3 526 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 Q9H8V8 135 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 HHLA3Q9XRX5 114 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 MRPS16Q9Y3D3 137 aaKnown RBP6.61□□□□□ -1.35
LINC01090-201ENST00000415357 ICOSQ9Y6W8 199 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
LINC01090-201ENST00000415357 TRAV4A0A0B4J268 109 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 C9JCJ5 164 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 PFDN1O60925 122 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 SEC11BP0C7V7 166 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 PPT1P50897 306 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 SAPCD1Q5SSQ6 148 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 CST9LP1Q5W188 147 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 DPPA3Q6W0C5 159 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 C6orf223Q8N319 242 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 OR4C5Q8NGB2 326 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 STOML3Q8TAV4 291 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 SFT2D1Q8WV19 159 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
LINC01090-201ENST00000415357 HERC2O95714 4834 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 IGKV3D-20A0A0C4DH25 116 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 FBLL1A6NHQ2 334 aaKnown RBP6.59□□□□□ -1.35
LINC01090-201ENST00000415357 PAGE4O60829 102 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 RNASE3P12724 160 aaKnown RBP6.59□□□□□ -1.35
LINC01090-201ENST00000415357 GYPEP15421 78 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 SLAQ13239 276 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 SOHLH1Q5JUK2 328 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 HIST1H2BAQ96A08 127 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 ZC2HC1AQ96GY0 325 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 C9orf85Q96MD7 179 aa6.59□□□□□ -1.35
LINC01090-201ENST00000415357 NKX6-2Q9C056 277 aaPredicted RBP6.59□□□□□ -1.35
LINC01090-201ENST00000415357 IGHV3-73A0A0B4J1V6 119 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 PGPEP1LA6NFU8 196 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 UMAD1C9J7I0 102 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 K7EQD1 137 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 M0R036 132 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 NXPH4O95158 308 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 TPT1P13693 172 aaKnown RBP6.58□□□□□ -1.36
LINC01090-201ENST00000415357 AKR1C3P42330 323 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 CRIP1P50238 77 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 UBE2G1P62253 170 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 MRPL23Q16540 153 aaKnown RBP6.58□□□□□ -1.36
LINC01090-201ENST00000415357 LGALSLQ3ZCW2 172 aaPredicted RBP6.58□□□□□ -1.36
LINC01090-201ENST00000415357 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 ZNF506Q5JVG8 444 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 Q6ZSN1 163 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 MBD3L1Q8WWY6 194 aa6.58□□□□□ -1.36
LINC01090-201ENST00000415357 hCG_2014768A0A024R1R8 64 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 FABP5P3A8MUU1 101 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 RS1O15537 224 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 SH2D1AO60880 128 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 ORM1P02763 201 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
LINC01090-201ENST00000415357 SRIP30626 198 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 TTC32Q5I0X7 151 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 CFAP126Q5VTH2 177 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 Q6ZNX1 250 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 TCTE3Q8IZS6 198 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 NHLRC2Q8NBF2 726 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 PCNPQ8WW12 178 aaKnown RBP6.57□□□□□ -1.36
LINC01090-201ENST00000415357 FMC1Q96HJ9 113 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
LINC01090-201ENST00000415357 TMSB15BA0A087X1C1 80 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 GRIFINA4D1Z8 144 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 B4DEV8 164 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 H3BVH4 76 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 SIVA1O15304 175 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 LTAP01374 205 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
LINC01090-201ENST00000415357 ASIPP42127 132 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 EIF5AP63241 154 aaKnown RBP6.56□□□□□ -1.36
LINC01090-201ENST00000415357 CCL20P78556 96 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 NEGR1Q7Z3B1 354 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 ZNF575Q86XF7 245 aa6.56□□□□□ -1.36
LINC01090-201ENST00000415357 TRBV6-1A0A0K0K1D8 114 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 KRBOX1C9JBD0 128 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 LINC00315P59091 139 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 FAM162BQ5T6X4 162 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 WFDC10BQ8IUB3 73 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 SLC25A29Q8N8R3 303 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 TCEAL7Q9BRU2 100 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 JPT2Q9H910 190 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 ZFP30Q9Y2G7 519 aa6.55□□□□□ -1.36
LINC01090-201ENST00000415357 A0A1W2PPQ1 181 aa6.54□□□□□ -1.36
LINC01090-201ENST00000415357 C1QBP02746 253 aa6.54□□□□□ -1.36
LINC01090-201ENST00000415357 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
LINC01090-201ENST00000415357 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms