RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 SNAI2O43623 268 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 ARMS2P0C7Q2 107 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 RNASE3P12724 160 aaKnown RBP13.42□□□□□ -0.26
CDC42-204ENST00000411827 CACNG7P62955 275 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 SYT8Q8NBV8 401 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 BORCS7Q96B45 105 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 MDFICQ9P1T7 246 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 PHLDA3Q9Y5J5 127 aa13.42□□□□□ -0.26
CDC42-204ENST00000411827 GRIFINA4D1Z8 144 aa13.41□□□□□ -0.26
CDC42-204ENST00000411827 CTRLP40313 264 aa13.41□□□□□ -0.26
CDC42-204ENST00000411827 ZNF575Q86XF7 245 aa13.41□□□□□ -0.26
CDC42-204ENST00000411827 ZFP82Q8N141 532 aa13.41□□□□□ -0.26
CDC42-204ENST00000411827 IL17DQ8TAD2 202 aa13.41□□□□□ -0.26
CDC42-204ENST00000411827 RPS10P5Q9NQ39 176 aa13.41□□□□□ -0.26
CDC42-204ENST00000411827 TRAV9-1A0A075B6T8 112 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 H3BVH4 76 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 SPART-AS1P0CW21 52 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 S100PP25815 95 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 KCNIP4Q6PIL6 250 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 RASL10AQ92737 203 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 BTF3L4Q96K17 158 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 CNFNQ9BYD5 112 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 RETNQ9HD89 108 aa13.4□□□□□ -0.26
CDC42-204ENST00000411827 IGHV4-4A0A075B6R2 117 aa13.39□□□□□ -0.27
CDC42-204ENST00000411827 A0A1B0GW15 77 aa13.39□□□□□ -0.27
CDC42-204ENST00000411827 PLAC8L1A1L4L8 177 aa13.39□□□□□ -0.27
CDC42-204ENST00000411827 HIGD1CA8MV81 97 aa13.39□□□□□ -0.27
CDC42-204ENST00000411827 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
CDC42-204ENST00000411827 CIDEAO60543 219 aa13.38□□□□□ -0.27
CDC42-204ENST00000411827 SPINK4O60575 86 aa13.38□□□□□ -0.27
CDC42-204ENST00000411827 LCE2DQ5TA82 110 aaPredicted RBP13.38□□□□□ -0.27
CDC42-204ENST00000411827 GTSF1Q8WW33 167 aa13.38□□□□□ -0.27
CDC42-204ENST00000411827 C18orf15Q96N68 181 aa13.38□□□□□ -0.27
CDC42-204ENST00000411827 NOP10Q9NPE3 64 aaKnown RBP13.38□□□□□ -0.27
CDC42-204ENST00000411827 A0A1B0GUT8 65 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 ATP6V1G1O75348 118 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 NXPH4O95158 308 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 PRM2P04554 102 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 GZMBP10144 247 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 ZNF876PQ49A33 203 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 SPANXN1Q5VSR9 72 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 LYZL1Q6UWQ5 148 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 DKK2Q9UBU2 259 aa13.37□□□□□ -0.27
CDC42-204ENST00000411827 S100A8P05109 93 aa13.36□□□□□ -0.27
CDC42-204ENST00000411827 EMP1P54849 157 aa13.36□□□□□ -0.27
CDC42-204ENST00000411827 RIGQ13278 110 aa13.36□□□□□ -0.27
CDC42-204ENST00000411827 ATP5L2Q7Z4Y8 100 aa13.36□□□□□ -0.27
CDC42-204ENST00000411827 LINC00612Q8N6U2 182 aa13.36□□□□□ -0.27
CDC42-204ENST00000411827 TPPP3Q9BW30 176 aa13.36□□□□□ -0.27
CDC42-204ENST00000411827 U3KQK5 164 aa13.36□□□□□ -0.27
CDC42-204ENST00000411827 A8MWV9 139 aa13.35□□□□□ -0.27
CDC42-204ENST00000411827 FAM222AQ5U5X8 452 aa13.35□□□□□ -0.27
CDC42-204ENST00000411827 NUP35Q8NFH5 326 aa13.35□□□□□ -0.27
CDC42-204ENST00000411827 PGLYRP4Q96LB8 373 aa13.35□□□□□ -0.27
CDC42-204ENST00000411827 TRGV1A0A0A0MS02 117 aa13.34□□□□□ -0.27
CDC42-204ENST00000411827 TRGC1P0CF51 173 aa13.34□□□□□ -0.27
CDC42-204ENST00000411827 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
CDC42-204ENST00000411827 SMCO4Q9NRQ5 59 aa13.34□□□□□ -0.27
CDC42-204ENST00000411827 A0A0J9YWU9 116 aa13.33□□□□□ -0.28
CDC42-204ENST00000411827 RASL11AQ6T310 242 aa13.33□□□□□ -0.28
CDC42-204ENST00000411827 OR10AG1Q8NH19 301 aa13.33□□□□□ -0.28
CDC42-204ENST00000411827 TRGV2A0A075B6R0 118 aa13.32□□□□□ -0.28
CDC42-204ENST00000411827 M0R381 172 aa13.32□□□□□ -0.28
CDC42-204ENST00000411827 NTF3P20783 257 aa13.32□□□□□ -0.28
CDC42-204ENST00000411827 DAD1P61803 113 aa13.32□□□□□ -0.28
CDC42-204ENST00000411827 AP1S3Q96PC3 154 aa13.32□□□□□ -0.28
CDC42-204ENST00000411827 RHODO00212 210 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 DEFB4AO15263 64 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 TWIST1Q15672 202 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 COX19Q49B96 90 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 Q6ZTI0 123 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 C11orf45Q8TAV5 145 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 DNAH9Q9NYC9 4486 aa13.31□□□□□ -0.28
CDC42-204ENST00000411827 TRAV4A0A0B4J268 109 aa13.3□□□□□ -0.28
CDC42-204ENST00000411827 SMIM17P0DL12 118 aa13.3□□□□□ -0.28
CDC42-204ENST00000411827 ZFP2Q6ZN57 461 aa13.3□□□□□ -0.28
CDC42-204ENST00000411827 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
CDC42-204ENST00000411827 GAGE12BA1L429 117 aa13.29□□□□□ -0.28
CDC42-204ENST00000411827 GAGE7O76087 117 aa13.29□□□□□ -0.28
CDC42-204ENST00000411827 GAGE12FP0CL80 117 aa13.29□□□□□ -0.28
CDC42-204ENST00000411827 GAGE12GP0CL81 117 aa13.29□□□□□ -0.28
CDC42-204ENST00000411827 GAGE12IP0CL82 117 aa13.29□□□□□ -0.28
CDC42-204ENST00000411827 FAM3BP58499 235 aaPredicted RBP13.29□□□□□ -0.28
CDC42-204ENST00000411827 FRZBQ92765 325 aa13.29□□□□□ -0.28
CDC42-204ENST00000411827 RS1O15537 224 aa13.28□□□□□ -0.28
CDC42-204ENST00000411827 DEFB130BP0DP73 79 aa13.28□□□□□ -0.28
CDC42-204ENST00000411827 DEFB130AP0DP74 79 aa13.28□□□□□ -0.28
CDC42-204ENST00000411827 HBBP68871 147 aa13.28□□□□□ -0.28
CDC42-204ENST00000411827 SLAQ13239 276 aa13.28□□□□□ -0.28
CDC42-204ENST00000411827 ATRAIDQ6UW56 229 aa13.28□□□□□ -0.28
CDC42-204ENST00000411827 OR4C5Q8NGB2 326 aa13.28□□□□□ -0.28
CDC42-204ENST00000411827 TRBV24-1A0A075B6N3 115 aa13.27□□□□□ -0.29
CDC42-204ENST00000411827 ATP5G1P05496 136 aa13.27□□□□□ -0.29
CDC42-204ENST00000411827 TMEM191AQ9H0A3 160 aa13.27□□□□□ -0.29
CDC42-204ENST00000411827 A0A1B0GXF2 115 aa13.26□□□□□ -0.29
CDC42-204ENST00000411827 CFAP126Q5VTH2 177 aa13.26□□□□□ -0.29
CDC42-204ENST00000411827 DPH3P1Q9H4G8 78 aa13.26□□□□□ -0.29
CDC42-204ENST00000411827 EDA2RQ9HAV5 297 aa13.26□□□□□ -0.29
CDC42-204ENST00000411827 CELA1Q9UNI1 258 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms