RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CCND2P30279 289 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CRYBB2P43320 205 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 RPS5P46782 204 aaKnown RBP-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CCL11P51671 97 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM33P57088 247 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 BVES-AS1Q5T3Y7 98 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 THOC7Q6I9Y2 204 aaKnown RBP-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 FUNDC1Q8IVP5 155 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 ZNF321PQ8N8H1 164 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 OR5B3Q8NH48 314 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 FAM172AQ8WUF8 416 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 DIRC1Q969H9 104 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 IFI27L1Q96BM0 104 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 MSANTD3Q96H12 275 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CDKN2AIPNLQ96HQ2 116 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 HIST1H2BLQ99880 126 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CRB3Q9BUF7 120 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 NAPBQ9H115 298 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 BTAF1O14981 1849 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CDK5RAP2Q96SN8 1893 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 M0QX08 132 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 COX7A2LO14548 114 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 MRASO14807 208 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 POLR2DO15514 142 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 HPGDSO60760 199 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SNAP29O95721 258 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 IFNA5P01569 189 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SERPINE2P07093 398 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SRP19P09132 144 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 LIMS3P0CW19 117 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 LIMS4P0CW20 117 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 OR1E1P30953 314 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 CRYBA4P53673 196 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 TPPP2P59282 170 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 RPL23AP62750 156 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 CCL20P78556 96 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 MRPS22P82650 360 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 MRPS36P82909 103 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 CFAP58Q5T655 872 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 C6orf183Q5T699 404 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SDHAF4Q5VUM1 108 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 GIMAP6Q6P9H5 292 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SHQ1Q6PI26 577 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SPESP1Q6UW49 350 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 TRAPPC6BQ86SZ2 158 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 BAGE2Q86Y30 109 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 STOML3Q8TAV4 291 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 METTL6Q8TCB7 284 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 LCN9Q8WX39 176 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 ROPN1LQ96C74 230 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 EFCAB11Q9BUY7 163 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SLC22A4Q9H015 551 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 C1orf21Q9H246 121 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 C11orf68Q9H3H3 251 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 EFCAB1Q9HAE3 211 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 PARVBQ9HBI1 364 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 FBXL12Q9NXK8 326 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 STMN3Q9NZ72 180 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 TMEM216Q9P0N5 145 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 ISY1Q9ULR0 285 aaKnown RBP-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 ABCC5O15440 1437 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 PTPRGP23470 1445 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 GLI2P10070 1586 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 MYOM1P52179 1685 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 SHPRHQ149N8 1683 aa-2.79□□□□□ -2.86
RNU4-88P-201ENST00000411220 MYH8P13535 1937 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 TRBV7-7A0A0K0K1E9 115 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 SERTM2A0A1B0GWG4 89 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 TAX1BP3O14907 124 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 RAB29O14966 203 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 PTBP3O95758 552 aaKnown RBP-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 CRYZL1O95825 349 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 SERPINA6P08185 405 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 PF4V1P10720 104 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H2BOP23527 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HMOX2P30519 316 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H2BBP33778 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H2BDP58876 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 RAB5BP61020 215 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 NCALDP61601 193 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H2BCP62807 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 RAD51Q06609 339 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 BAXQ07812 192 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 MZT1Q08AG7 82 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST2H2BEQ16778 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 FBXO48Q5FWF7 155 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST2H2BFQ5QNW6 126 aaPredicted RBP-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 RPL22L1Q6P5R6 122 aaKnown RBP-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 NUBPLQ8TB37 319 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H2BHQ93079 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 RPEQ96AT9 228 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 RMDN2Q96LZ7 410 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 CCL13Q99616 98 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H2BNQ99877 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H2BMQ99879 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 TMEM43Q9BTV4 400 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 PRO1933Q9H354 126 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 GNG12Q9UBI6 72 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 COPS7AQ9UBW8 275 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 TAGLN3Q9UI15 199 aa-2.8□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms