RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 DOPEY1Q5JWR5 2465 aa11.94□□□□□ -0.5
HOXD3-202ENST00000410016 SRD5A1P18405 259 aa11.94□□□□□ -0.5
HOXD3-202ENST00000410016 CRYBG3Q68DQ2 2970 aa11.94□□□□□ -0.5
HOXD3-202ENST00000410016 H3BUT2 72 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 K7EMT4 169 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 HLA-DRB4P13762 266 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 HLA-DRB4X5D2U9 266 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 PIEZO1Q92508 2521 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 USP9XQ93008 2570 aaPredicted RBP11.93□□□□□ -0.5
HOXD3-202ENST00000410016 CSPG4Q6UVK1 2322 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 GAGE10A6NGK3 116 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 KLLNB2CW77 178 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 B4DSR2 109 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
HOXD3-202ENST00000410016 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 TOMM6Q96B49 74 aa11.93□□□□□ -0.5
HOXD3-202ENST00000410016 ORMDL2Q53FV1 153 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 POM121L12Q8N7R1 296 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 MAPKAPK5-AS1Q8N8E1 139 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 NAA38Q9BRA0 125 aaKnown RBP11.92□□□□□ -0.5
HOXD3-202ENST00000410016 CHAC1Q9BUX1 264 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 ZNF580Q9UK33 172 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 TRAV12-1A0A0B4J245 112 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 NXPH4O95158 308 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 PSMB8P28062 276 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 FXYD2P54710 66 aa11.92□□□□□ -0.5
HOXD3-202ENST00000410016 K7EMI3 77 aa11.91□□□□□ -0.5
HOXD3-202ENST00000410016 LINC00315P59091 139 aa11.91□□□□□ -0.5
HOXD3-202ENST00000410016 RAB37Q96AX2 223 aa11.91□□□□□ -0.5
HOXD3-202ENST00000410016 KIF25-AS1Q9Y6Z4 181 aa11.91□□□□□ -0.5
HOXD3-202ENST00000410016 SLC25A16P16260 332 aa11.91□□□□□ -0.5
HOXD3-202ENST00000410016 PLNP26678 52 aa11.91□□□□□ -0.5
HOXD3-202ENST00000410016 AP1S3Q96PC3 154 aa11.91□□□□□ -0.5
HOXD3-202ENST00000410016 F8VRH5 84 aa11.9□□□□□ -0.5
HOXD3-202ENST00000410016 MUC4Q99102 2169 aa11.9□□□□□ -0.5
HOXD3-202ENST00000410016 H7C1H1 209 aa11.9□□□□□ -0.51
HOXD3-202ENST00000410016 GCSHP23434 173 aa11.9□□□□□ -0.51
HOXD3-202ENST00000410016 NEXN-AS1Q8NBZ9 246 aa11.9□□□□□ -0.51
HOXD3-202ENST00000410016 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.51
HOXD3-202ENST00000410016 TM2D2Q9BX73 214 aa11.9□□□□□ -0.51
HOXD3-202ENST00000410016 MGPP08493 103 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 C10orf99Q6UWK7 81 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 GTF2H5Q6ZYL4 71 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 NRGNQ92686 78 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 K7EP34 96 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 IGHV4-59P01825 116 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 GATA3P23771 443 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 IGSF10Q6WRI0 2623 aa11.89□□□□□ -0.51
HOXD3-202ENST00000410016 CACNA1AO00555 2505 aa11.88□□□□□ -0.51
HOXD3-202ENST00000410016 A0A1W2PPM0 123 aa11.88□□□□□ -0.51
HOXD3-202ENST00000410016 PHLDA1Q8WV24 401 aaPredicted RBP11.88□□□□□ -0.51
HOXD3-202ENST00000410016 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
HOXD3-202ENST00000410016 IGHV4OR15-8A0A075B7B6 117 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 A0A087WW49 117 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 SMIM13P0DJ93 91 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 ID1P41134 155 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 SCGB2A2Q13296 93 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 C2orf66Q6UXQ4 117 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
HOXD3-202ENST00000410016 A0A1B0GV72 72 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 PPP1R17O96001 155 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 CEND1Q8N111 149 aa11.87□□□□□ -0.51
HOXD3-202ENST00000410016 FAM159AQ6UWV7 190 aa11.86□□□□□ -0.51
HOXD3-202ENST00000410016 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
HOXD3-202ENST00000410016 SAMD13Q5VXD3 122 aa11.86□□□□□ -0.51
HOXD3-202ENST00000410016 JPT2Q9H910 190 aa11.86□□□□□ -0.51
HOXD3-202ENST00000410016 DSCR9P59020 149 aa11.85□□□□□ -0.51
HOXD3-202ENST00000410016 A0A096LNT2 108 aa11.85□□□□□ -0.51
HOXD3-202ENST00000410016 TRAV12-3A0A0B4J271 114 aa11.84□□□□□ -0.51
HOXD3-202ENST00000410016 K7ERJ3 54 aa11.84□□□□□ -0.51
HOXD3-202ENST00000410016 POLR2KP53803 58 aaKnown RBP11.84□□□□□ -0.51
HOXD3-202ENST00000410016 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
HOXD3-202ENST00000410016 SAMD5Q5TGI4 173 aa11.84□□□□□ -0.51
HOXD3-202ENST00000410016 USP9YO00507 2555 aaPredicted RBP11.84□□□□□ -0.51
HOXD3-202ENST00000410016 PRSS29PA6NIE9 313 aa11.84□□□□□ -0.51
HOXD3-202ENST00000410016 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
HOXD3-202ENST00000410016 SPCS1Q9Y6A9 102 aa11.84□□□□□ -0.51
HOXD3-202ENST00000410016 ZANQ9Y493 2812 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 TMEM89A2RUT3 159 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 CD7P09564 240 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 TAL2Q16559 108 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 LINC01356Q8N9X3 169 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 CRYGDP07320 174 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 ZNF688P0C7X2 276 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 ODF3Q96PU9 254 aa11.83□□□□□ -0.52
HOXD3-202ENST00000410016 FBN2P35556 2912 aa11.82□□□□□ -0.52
HOXD3-202ENST00000410016 TSHBP01222 138 aa11.82□□□□□ -0.52
HOXD3-202ENST00000410016 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
HOXD3-202ENST00000410016 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
HOXD3-202ENST00000410016 A0A0J9YX75 114 aa11.82□□□□□ -0.52
HOXD3-202ENST00000410016 DUSP14O95147 198 aaKnown RBP11.82□□□□□ -0.52
HOXD3-202ENST00000410016 FABP2P12104 132 aa11.82□□□□□ -0.52
HOXD3-202ENST00000410016 OR5A1Q8NGJ0 315 aa11.82□□□□□ -0.52
HOXD3-202ENST00000410016 A0A087WWL8 130 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 K7EQG2 157 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 C9orf85Q96MD7 179 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 IGHV3-16A0A0C4DH30 117 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 IGIPA6NJ69 53 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms