RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PCBD2Q9H0N5 130 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 AHCTF1Q8WYP5 2266 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 NCOR1O75376 2440 aa-0.32□□□□□ -2.46
PMS1-203ENST00000409593 SSC5DA1L4H1 1573 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 ARHGAP31Q2M1Z3 1444 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 A0A087WTM6 91 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 TRBV10-1A0A0K0K1A3 114 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 IFITM1P13164 125 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 CKS2P33552 79 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 RPL22P35268 128 aaKnown RBP-0.33□□□□□ -2.46
PMS1-203ENST00000409593 SRP9P49458 86 aaKnown RBP-0.33□□□□□ -2.46
PMS1-203ENST00000409593 DSCR8Q96T75 97 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 SMPXQ9UHP9 88 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 MYH1P12882 1939 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.33□□□□□ -2.46
PMS1-203ENST00000409593 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 IGHV1-24A0A0C4DH33 117 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 OR2H2O95918 312 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 TCRAP04437 139 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 ELOF1P60002 83 aaKnown RBP-0.33□□□□□ -2.46
PMS1-203ENST00000409593 NDUFAF1Q9Y375 327 aa-0.33□□□□□ -2.46
PMS1-203ENST00000409593 SRRM2Q9UQ35 2752 aaKnown RBP-0.34□□□□□ -2.46
PMS1-203ENST00000409593 VIRMAQ69YN4 1812 aaKnown RBP-0.34□□□□□ -2.46
PMS1-203ENST00000409593 FAT1Q14517 4588 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 PTPRMP28827 1452 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 GVQW2A0A096LPI5 108 aaPredicted RBP-0.34□□□□□ -2.46
PMS1-203ENST00000409593 C9JAW5 83 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 E5RI56 91 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 E7EQ34 232 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 UQCRQO14949 82 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 POLR2JP52435 117 aaKnown RBP-0.34□□□□□ -2.46
PMS1-203ENST00000409593 COX6A2Q02221 97 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 CCDC115Q96NT0 180 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 PRR15LQ9BU68 103 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 PKD1L1Q8TDX9 2849 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 CDK13Q14004 1512 aaKnown RBP-0.34□□□□□ -2.46
PMS1-203ENST00000409593 LAMB1P07942 1786 aa-0.34□□□□□ -2.46
PMS1-203ENST00000409593 MED23Q9ULK4 1368 aa-0.35□□□□□ -2.46
PMS1-203ENST00000409593 KMT2AQ03164 3969 aa-0.35□□□□□ -2.46
PMS1-203ENST00000409593 PLXNA2O75051 1894 aa-0.35□□□□□ -2.46
PMS1-203ENST00000409593 LPAP08519 4548 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 HELZP42694 1942 aaKnown RBP-0.35□□□□□ -2.47
PMS1-203ENST00000409593 TRAV17A0A0B4J275 112 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 FAM107AO95990 144 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 UNQ5815/PRO19632Q6UWF5 114 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 TMEM141Q96I45 108 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 KDM5CP41229 1560 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 BIVM-ERCC5R4GMW8 1640 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 ZNF292O60281 2723 aa-0.35□□□□□ -2.47
PMS1-203ENST00000409593 EPPK1P58107 5090 aaKnown RBP-0.36□□□□□ -2.47
PMS1-203ENST00000409593 TEX49A0A1B0GTD5 131 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 MCRIP1C9JLW8 97 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 NMBP08949 121 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 PCBD1P61457 104 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 OR2T2Q6IF00 324 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 BPESC1Q9GZL8 116 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 METTL1Q9UBP6 276 aaKnown RBP-0.36□□□□□ -2.47
PMS1-203ENST00000409593 ATPIF1Q9UII2 106 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 PBRM1Q86U86 1689 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 CASZ1Q86V15 1759 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 DCHS2Q6V1P9 2916 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 ZANQ9Y493 2812 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 NHSL1Q5SYE7 1610 aa-0.36□□□□□ -2.47
PMS1-203ENST00000409593 TRAV12-2A0A075B6T6 113 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 AKR1D1P51857 326 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 HSD17B12Q53GQ0 312 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 SLC25A26Q70HW3 274 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 OR9Q1Q8NGQ5 310 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 DNAJC15Q9Y5T4 150 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 F2Z2F3 143 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 PRM1P04553 51 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 SDC4P31431 198 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 SPRR2BP35325 72 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 LSM3P62310 102 aaKnown RBP-0.37□□□□□ -2.47
PMS1-203ENST00000409593 TMEM128Q5BJH2 165 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 SAMD13Q5VXD3 122 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 TOMM20LQ6UXN7 152 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 TMEM91Q6ZNR0 172 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 PPDPFLQ8WWR9 84 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 Q96NJ1 140 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 BET1LQ9NYM9 111 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 OVOS2A0A0G2JMS6 1433 aa-0.37□□□□□ -2.47
PMS1-203ENST00000409593 ZNF142P52746 1687 aaPredicted RBP-0.38□□□□□ -2.47
PMS1-203ENST00000409593 TENM2Q9NT68 2774 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 HECTD4Q9Y4D8 3996 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 PNMA8CA0A1B0GUJ8 204 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 A0A1B0GW64 132 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 ZNF670-ZNF695F2Z2N8 137 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 PGRMC1O00264 195 aaKnown RBP-0.38□□□□□ -2.47
PMS1-203ENST00000409593 CFDP00746 253 aaPredicted RBP-0.38□□□□□ -2.47
PMS1-203ENST00000409593 IFNA21P01568 189 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 MT-ND4LP03901 98 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 HIST1H1BP16401 226 aaKnown RBP-0.38□□□□□ -2.47
PMS1-203ENST00000409593 NPC2P61916 151 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 PLGLB1Q02325 96 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 SMIM11BQ8TCY0 68 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 SLC35B3Q9H1N7 401 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 COA4Q9NYJ1 87 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 ALMS1Q8TCU4 4167 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms