RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-203ENST00000409225 EIF3GO75821 320 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHMP3-203ENST00000409225 C14orf178Q8N769 122 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-203ENST00000409225 TMEM75Q8N9X5 138 aa10.72□□□□□ -0.69
CHMP3-203ENST00000409225 SEC22CQ9BRL7 303 aa10.72□□□□□ -0.69
CHMP3-203ENST00000409225 KCNIP2Q9NS61 270 aa10.72□□□□□ -0.69
CHMP3-203ENST00000409225 A0A087WX48 190 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 PANO1I0J062 215 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 ZNF80P51504 273 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-203ENST00000409225 GNG5P63218 68 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 ELOBQ15370 118 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 KHDC3LQ587J8 217 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 FAM74A1Q5RGS3 127 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 ATRAIDQ6UW56 229 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 PTH2Q96A98 100 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 SGK494Q96LW2 274 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 C1orf43Q9BWL3 253 aa10.71□□□□□ -0.69
CHMP3-203ENST00000409225 RNASE3P12724 160 aaKnown RBP10.7□□□□□ -0.7
CHMP3-203ENST00000409225 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-203ENST00000409225 IL15RAQ13261 267 aa10.7□□□□□ -0.7
CHMP3-203ENST00000409225 FFAR4Q5NUL3 377 aa10.7□□□□□ -0.7
CHMP3-203ENST00000409225 KCNIP4Q6PIL6 250 aa10.7□□□□□ -0.7
CHMP3-203ENST00000409225 ZFP2Q6ZN57 461 aa10.7□□□□□ -0.7
CHMP3-203ENST00000409225 OR10G9Q8NGN4 311 aa10.7□□□□□ -0.7
CHMP3-203ENST00000409225 WDR61Q9GZS3 305 aaKnown RBP10.7□□□□□ -0.7
CHMP3-203ENST00000409225 MBD2Q9UBB5 411 aa10.7□□□□□ -0.7
CHMP3-203ENST00000409225 A0A0D9SG52 128 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 USP17L23D6RBM5 183 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 C17orf112F2Z3M2 114 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 Q0VG73 95 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 ODF1Q14990 250 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 CNPY1Q3B7I2 92 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 LGALSLQ3ZCW2 172 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-203ENST00000409225 C4orf48Q5BLP8 95 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 LINC00479Q96M42 142 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 NDFIP1Q9BT67 221 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 JPT2Q9H910 190 aa10.69□□□□□ -0.7
CHMP3-203ENST00000409225 A8MWV9 139 aa10.68□□□□□ -0.7
CHMP3-203ENST00000409225 TAAR5O14804 337 aa10.68□□□□□ -0.7
CHMP3-203ENST00000409225 TAS2R45P59539 299 aa10.68□□□□□ -0.7
CHMP3-203ENST00000409225 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
CHMP3-203ENST00000409225 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
CHMP3-203ENST00000409225 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
CHMP3-203ENST00000409225 TRAV6A0A075B6T7 132 aa10.67□□□□□ -0.7
CHMP3-203ENST00000409225 GCGP01275 180 aa10.67□□□□□ -0.7
CHMP3-203ENST00000409225 HLA-DQA1P01909 254 aa10.67□□□□□ -0.7
CHMP3-203ENST00000409225 PRSS1P07477 247 aa10.67□□□□□ -0.7
CHMP3-203ENST00000409225 C9orf163Q8N9P6 203 aa10.67□□□□□ -0.7
CHMP3-203ENST00000409225 SDHCQ99643 169 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-203ENST00000409225 UFSP1Q6NVU6 142 aa10.66□□□□□ -0.7
CHMP3-203ENST00000409225 ENHOQ6UWT2 76 aa10.66□□□□□ -0.7
CHMP3-203ENST00000409225 CRPP02741 224 aa10.65□□□□□ -0.7
CHMP3-203ENST00000409225 DGAT2L7PQ6IED9 249 aa10.65□□□□□ -0.7
CHMP3-203ENST00000409225 ARL6IP6Q8N6S5 226 aa10.65□□□□□ -0.7
CHMP3-203ENST00000409225 HSD17B11Q8NBQ5 300 aa10.65□□□□□ -0.7
CHMP3-203ENST00000409225 OR2G3Q8NGZ4 309 aa10.65□□□□□ -0.7
CHMP3-203ENST00000409225 CCDC160A6NGH7 325 aa10.64□□□□□ -0.71
CHMP3-203ENST00000409225 TMEM262E9PQX1 116 aa10.64□□□□□ -0.71
CHMP3-203ENST00000409225 IL7P13232 177 aa10.64□□□□□ -0.71
CHMP3-203ENST00000409225 S100A4P26447 101 aaKnown RBP10.64□□□□□ -0.71
CHMP3-203ENST00000409225 C15orf54Q8N8G6 183 aa10.64□□□□□ -0.71
CHMP3-203ENST00000409225 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
CHMP3-203ENST00000409225 TCRBP04435 133 aa10.63□□□□□ -0.71
CHMP3-203ENST00000409225 SDIM1Q6ZPB5 146 aa10.63□□□□□ -0.71
CHMP3-203ENST00000409225 NUDT15Q9NV35 164 aa10.63□□□□□ -0.71
CHMP3-203ENST00000409225 OR5AC2Q9NZP5 309 aa10.63□□□□□ -0.71
CHMP3-203ENST00000409225 ZFP69Q49AA0 526 aa10.62□□□□□ -0.71
CHMP3-203ENST00000409225 SMUG1Q53HV7 270 aa10.62□□□□□ -0.71
CHMP3-203ENST00000409225 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
CHMP3-203ENST00000409225 FAM74A4Q5TZK3 123 aa10.62□□□□□ -0.71
CHMP3-203ENST00000409225 OR10G7Q8NGN6 311 aa10.62□□□□□ -0.71
CHMP3-203ENST00000409225 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
CHMP3-203ENST00000409225 PLA2G10O15496 165 aa10.61□□□□□ -0.71
CHMP3-203ENST00000409225 LYRM1O43325 122 aa10.61□□□□□ -0.71
CHMP3-203ENST00000409225 RPL19P84098 196 aaKnown RBP10.61□□□□□ -0.71
CHMP3-203ENST00000409225 PQLC2Q6ZP29 291 aa10.61□□□□□ -0.71
CHMP3-203ENST00000409225 DPH3Q96FX2 82 aa10.61□□□□□ -0.71
CHMP3-203ENST00000409225 IGKV3D-20A0A0C4DH25 116 aa10.6□□□□□ -0.71
CHMP3-203ENST00000409225 SERTM2A0A1B0GWG4 89 aa10.6□□□□□ -0.71
CHMP3-203ENST00000409225 RHODO00212 210 aa10.6□□□□□ -0.71
CHMP3-203ENST00000409225 HMGB3O15347 200 aaKnown RBP10.6□□□□□ -0.71
CHMP3-203ENST00000409225 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
CHMP3-203ENST00000409225 TCRAP04437 139 aa10.6□□□□□ -0.71
CHMP3-203ENST00000409225 LRRC37A5PQ49AS3 106 aa10.6□□□□□ -0.71
CHMP3-203ENST00000409225 MPV17L2Q567V2 206 aa10.6□□□□□ -0.71
CHMP3-203ENST00000409225 PRNTQ86SH4 94 aa10.6□□□□□ -0.71
CHMP3-203ENST00000409225 A0A087WWL8 130 aa10.59□□□□□ -0.71
CHMP3-203ENST00000409225 SIX6O95475 246 aa10.59□□□□□ -0.71
CHMP3-203ENST00000409225 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
CHMP3-203ENST00000409225 LINC01600Q96MT4 127 aa10.59□□□□□ -0.71
CHMP3-203ENST00000409225 A0A1W2PPV4 95 aa10.58□□□□□ -0.72
CHMP3-203ENST00000409225 H0YIZ8 118 aa10.58□□□□□ -0.72
CHMP3-203ENST00000409225 H3BVH4 76 aa10.58□□□□□ -0.72
CHMP3-203ENST00000409225 K7EQM0 130 aa10.58□□□□□ -0.72
CHMP3-203ENST00000409225 H2AFB2P0C5Z0 115 aa10.58□□□□□ -0.72
CHMP3-203ENST00000409225 FLI1Q01543 452 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-203ENST00000409225 C5orf17Q8NAS9 161 aa10.58□□□□□ -0.72
CHMP3-203ENST00000409225 SCGB1C1Q8TD33 95 aa10.58□□□□□ -0.72
CHMP3-203ENST00000409225 A0A087WYN8 130 aa10.57□□□□□ -0.72
CHMP3-203ENST00000409225 PHOX2AO14813 284 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms