RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 CFHR4Q92496 578 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 TENM4Q6N022 2769 aa12.43□□□□□ -0.42
LSP1-204ENST00000406638 ZFAND6Q6FIF0 208 aa12.43□□□□□ -0.42
LSP1-204ENST00000406638 IGHV3-35A0A0C4DH35 117 aa12.43□□□□□ -0.42
LSP1-204ENST00000406638 ZNF815PA8K554 130 aa12.43□□□□□ -0.42
LSP1-204ENST00000406638 PRAC2D3DTV9 90 aa12.43□□□□□ -0.42
LSP1-204ENST00000406638 TIMM23O14925 209 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 TCL1BO95988 128 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 TEX29Q8N6K0 151 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 KLHL30-AS1Q8NEE0 82 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 IGHV4-61A0A0C4DH41 118 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 LY6LH3BQJ8 138 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 KRTAP10-9P60411 292 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 IL17RELQ6ZVW7 336 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 SMAD5-AS1Q9Y6J3 95 aa12.42□□□□□ -0.42
LSP1-204ENST00000406638 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 LINC01619G3V211 115 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 ZNF688P0C7X2 276 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 SCGB3A1Q96QR1 104 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 SLC25A16P16260 332 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 RPL7P18124 248 aaKnown RBP12.41□□□□□ -0.42
LSP1-204ENST00000406638 UBE2D1P51668 147 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 UBE2D3P61077 147 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 UBE2D2P62837 147 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 HIST2H2BCQ6DN03 193 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 ZANQ9Y493 2812 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 ATP5J2P56134 94 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 RNF182Q8N6D2 247 aa12.41□□□□□ -0.42
LSP1-204ENST00000406638 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
LSP1-204ENST00000406638 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
LSP1-204ENST00000406638 Q6ZQT7 251 aa12.4□□□□□ -0.42
LSP1-204ENST00000406638 ANKRD29Q8N6D5 301 aa12.4□□□□□ -0.42
LSP1-204ENST00000406638 DOPEY2Q9Y3R5 2298 aa12.4□□□□□ -0.42
LSP1-204ENST00000406638 A8MWV9 139 aa12.4□□□□□ -0.43
LSP1-204ENST00000406638 PRTN3P24158 256 aa12.4□□□□□ -0.43
LSP1-204ENST00000406638 TRBV20-1A0A075B6N2 111 aa12.39□□□□□ -0.43
LSP1-204ENST00000406638 SIRPDQ9H106 197 aa12.39□□□□□ -0.43
LSP1-204ENST00000406638 TRAV12-1A0A0B4J245 112 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 CD7P09564 240 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 OR11H6Q8NGC7 330 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 SPRY2O43597 315 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 MFAP4P55083 255 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 SRSF2Q01130 221 aaKnown RBP12.38□□□□□ -0.43
LSP1-204ENST00000406638 SHISA2Q6UWI4 295 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 NDUFA11Q86Y39 141 aa12.38□□□□□ -0.43
LSP1-204ENST00000406638 ANKRD17O75179 2603 aaKnown RBP12.37□□□□□ -0.43
LSP1-204ENST00000406638 ODF3BA8MYP8 253 aa12.37□□□□□ -0.43
LSP1-204ENST00000406638 F8W735 103 aaPredicted RBP12.37□□□□□ -0.43
LSP1-204ENST00000406638 M0R1W7 72 aa12.37□□□□□ -0.43
LSP1-204ENST00000406638 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
LSP1-204ENST00000406638 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
LSP1-204ENST00000406638 MAPK1IP1LQ8NDC0 245 aa12.37□□□□□ -0.43
LSP1-204ENST00000406638 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
LSP1-204ENST00000406638 KMT2BQ9UMN6 2715 aaPredicted RBP12.37□□□□□ -0.43
LSP1-204ENST00000406638 AJUBAQ96IF1 538 aa12.37□□□□□ -0.43
LSP1-204ENST00000406638 RASL10AQ92737 203 aa12.36□□□□□ -0.43
LSP1-204ENST00000406638 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
LSP1-204ENST00000406638 SMIM2Q9BVW6 85 aa12.36□□□□□ -0.43
LSP1-204ENST00000406638 EMP1P54849 157 aa12.36□□□□□ -0.43
LSP1-204ENST00000406638 HES1Q14469 280 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 CITED1Q99966 193 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 IGHV3-66A0A0C4DH42 116 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 IGHV7-4-1A0A0J9YVY3 117 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 DEFB104AQ8WTQ1 72 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 VCX2Q9H322 139 aa12.35□□□□□ -0.43
LSP1-204ENST00000406638 CCDC179H3BU77 68 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 CRLF1O75462 422 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 COX6B1P14854 86 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 C21orf62Q9NYP8 219 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 CSPG4Q6UVK1 2322 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 IGHV3OR16-13A0A075B7E8 117 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 IGHV3-74A0A0B4J1X5 117 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 TRAV8-2A0A0B4J237 113 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 CFC1BP0CG36 223 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 CFC1P0CG37 223 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 CRIP2P52943 208 aaPredicted RBP12.34□□□□□ -0.43
LSP1-204ENST00000406638 HERV-K104P63124 156 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 LYRM7Q5U5X0 104 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
LSP1-204ENST00000406638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.43
LSP1-204ENST00000406638 HELZ2Q9BYK8 2649 aaKnown RBP12.33□□□□□ -0.44
LSP1-204ENST00000406638 TMEM262E9PQX1 116 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 GAGE2BQ13066 116 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 GAGE2EQ4V326 116 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 AGPAT4-IT1Q9H0P7 198 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 Q6ZS46 218 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 RPL39LQ96EH5 51 aaKnown RBP12.33□□□□□ -0.44
LSP1-204ENST00000406638 RAX2Q96IS3 184 aa12.33□□□□□ -0.44
LSP1-204ENST00000406638 ZNF469Q96JG9 3925 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms