RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 PCP4P48539 62 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 DSCR9P59020 149 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 TM4SF20Q53R12 229 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 MUC6Q6W4X9 2439 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 TIMM17AQ99595 171 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 CCL19Q99731 98 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 LINC00527Q9UJ94 153 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 CHTOPQ9Y3Y2 248 aaKnown RBP2.87□□□□□ -1.95
RTN4-209ENST00000405240 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 K7EQG2 157 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 LGALS1P09382 135 aaKnown RBP2.87□□□□□ -1.95
RTN4-209ENST00000405240 EDN2P20800 178 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 RNASE4P34096 147 aaKnown RBP2.87□□□□□ -1.95
RTN4-209ENST00000405240 C12orf74Q32Q52 190 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 C2orf66Q6UXQ4 117 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 FOXI2Q6ZQN5 318 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 C14orf178Q8N769 122 aaPredicted RBP2.87□□□□□ -1.95
RTN4-209ENST00000405240 TMEM141Q96I45 108 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 AP1S3Q96PC3 154 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 CSTL1Q9H114 145 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 TMEM160Q9NX00 188 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 TLN1Q9Y490 2541 aaKnown RBP2.87□□□□□ -1.95
RTN4-209ENST00000405240 CR1P17927 2039 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 A0A0J9YX75 114 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 PRSS29PA6NIE9 313 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 F6UB75 175 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 UBE2D1P51668 147 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 DEFB1P60022 68 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 NSUN5P1Q3KNT7 163 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 SUMO4Q6EEV6 95 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 AMTNQ6UX39 209 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 ZFP2Q6ZN57 461 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 FAM104AQ969W3 186 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 SCGB3A1Q96QR1 104 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 SPANXB1Q9NS25 103 aaPredicted RBP2.87□□□□□ -1.95
RTN4-209ENST00000405240 UFC1Q9Y3C8 167 aa2.87□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3OR16-10A0A075B7F0 116 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 J3QLI3 93 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 K7ERU9 68 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 FABP2P12104 132 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 ZNF876PQ49A33 203 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 NFE4Q86UQ8 179 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 Q8N2B8 174 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 DLX4Q92988 240 aaPredicted RBP2.86□□□□□ -1.95
RTN4-209ENST00000405240 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 PHLDA3Q9Y5J5 127 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 SPCS1Q9Y6A9 102 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 ITPR1Q14643 2758 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 C11orf86A6NJI1 115 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 B4DSR2 109 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 F8W1H4 67 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 M0QY20 66 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 SAP30O75446 220 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 ID1P41134 155 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 PIK3CD-AS1Q5SR53 167 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 TRAV2A0A0B4J234 112 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 K7ERJ3 54 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 VCYO14598 125 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 CD7P09564 240 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 RHOHQ15669 191 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 RRN3P1Q2M238 152 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 PAPPA-AS1Q5QFB9 102 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 LINC01600Q96MT4 127 aa2.86□□□□□ -1.95
RTN4-209ENST00000405240 SPRY2O43597 315 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 DUSP14O95147 198 aaKnown RBP2.85□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3-11P01762 117 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 GCSHP23434 173 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 TCTAP57738 103 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 LY6EQ16553 131 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 CLEC2AQ6UVW9 174 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 HIVEP3Q5T1R4 2406 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 NACAE9PAV3 2078 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 P0DMU3 169 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 FAM231AP0DMU4 169 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 FAM231CP0DMU5 169 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 PF4V1P10720 104 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 UBE2D3P61077 147 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 UBE2D2P62837 147 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 PMVKQ15126 192 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 Q6YL49 198 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 SBSPONQ8IVN8 264 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 SPAG8Q99932 426 aaPredicted RBP2.85□□□□□ -1.95
RTN4-209ENST00000405240 AGRNO00468 2067 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 A0A0J9YY99 117 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 CRYBA4P53673 196 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 LINC01356Q8N9X3 169 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 ZNRF2Q8NHG8 242 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 RAB37Q96AX2 223 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 PLEKHB2Q96CS7 222 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 NAA38Q9BRA0 125 aaKnown RBP2.85□□□□□ -1.95
RTN4-209ENST00000405240 PRADC1Q9BSG0 188 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 JPT2Q9H910 190 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 ZNF702PQ9H963 129 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 CYSLTR1Q9Y271 337 aa2.85□□□□□ -1.95
RTN4-209ENST00000405240 OR11H12B2RN74 326 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 ELANEP08246 267 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 S100A4P26447 101 aaKnown RBP2.84□□□□□ -1.95
RTN4-209ENST00000405240 DEFB112Q30KQ8 113 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 FAM159AQ6UWV7 190 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms