RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 DOCK3Q8IZD9 2030 aa9.58□□□□□ -0.88
CACNA1C-219ENST00000399649 A4D1N5 150 aa9.58□□□□□ -0.88
CACNA1C-219ENST00000399649 RNF138Q8WVD3 245 aa9.58□□□□□ -0.88
CACNA1C-219ENST00000399649 TRBV7-3A0A075B6L6 115 aa9.58□□□□□ -0.88
CACNA1C-219ENST00000399649 TMEM256-PLSCR3K7ERE1 68 aa9.58□□□□□ -0.88
CACNA1C-219ENST00000399649 PROK2Q9HC23 129 aa9.58□□□□□ -0.88
CACNA1C-219ENST00000399649 LGALS9O00182 355 aa9.57□□□□□ -0.88
CACNA1C-219ENST00000399649 C16orf54Q6UWD8 224 aa9.57□□□□□ -0.88
CACNA1C-219ENST00000399649 AJUBAQ96IF1 538 aa9.57□□□□□ -0.88
CACNA1C-219ENST00000399649 FGF23Q9GZV9 251 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-219ENST00000399649 ANK1P16157 1881 aa9.57□□□□□ -0.88
CACNA1C-219ENST00000399649 DAND5Q8N907 189 aa9.57□□□□□ -0.88
CACNA1C-219ENST00000399649 IGHV4-38-2P0DP08 117 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 A0A0J9YXV3 536 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 SPAG11BQ08648 103 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 LECT2O14960 151 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 MYO7BQ6PIF6 2116 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 A0A087WW49 117 aa9.56□□□□□ -0.88
CACNA1C-219ENST00000399649 FAM215AQ9Y5M1 114 aa9.55□□□□□ -0.88
CACNA1C-219ENST00000399649 PLA2G2CQ5R387 149 aa9.55□□□□□ -0.88
CACNA1C-219ENST00000399649 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
CACNA1C-219ENST00000399649 THSD7BQ9C0I4 1608 aa9.55□□□□□ -0.88
CACNA1C-219ENST00000399649 COX7BP24311 80 aa9.55□□□□□ -0.88
CACNA1C-219ENST00000399649 TICRRQ7Z2Z1 1910 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 COL4A6Q14031 1691 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 CTSZQ9UBR2 303 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 K7ERS5 55 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 C14orf177Q52M58 125 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 BRK1Q8WUW1 75 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 C4orf3Q8WVX3 66 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 CRYGBP07316 175 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 I3L2K1 104 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 Q8N1Y9 231 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 C1orf147Q96MC9 270 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 FAM110AQ9BQ89 295 aa9.54□□□□□ -0.88
CACNA1C-219ENST00000399649 ZSWIM8A7E2V4 1837 aa9.53□□□□□ -0.88
CACNA1C-219ENST00000399649 IGHV7-81A0A0B4J1V7 117 aa9.53□□□□□ -0.88
CACNA1C-219ENST00000399649 PLXNA3P51805 1871 aa9.53□□□□□ -0.88
CACNA1C-219ENST00000399649 IGHV4-30-2A0A087WSY4 118 aa9.53□□□□□ -0.88
CACNA1C-219ENST00000399649 IL17DQ8TAD2 202 aa9.53□□□□□ -0.88
CACNA1C-219ENST00000399649 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
CACNA1C-219ENST00000399649 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.88
CACNA1C-219ENST00000399649 TEN1Q86WV5 123 aa9.52□□□□□ -0.88
CACNA1C-219ENST00000399649 KLK12Q9UKR0 248 aa9.52□□□□□ -0.88
CACNA1C-219ENST00000399649 FER1L5A0AVI2 2057 aa9.52□□□□□ -0.88
CACNA1C-219ENST00000399649 SEC16AO15027 2179 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 IGHV4-61A0A0C4DH41 118 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 C2orf70A6NJV1 201 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 MYCNOSP40205 109 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 PDE6GP18545 87 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 U3KQA8 63 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 IGLV11-55A0A075B6I3 123 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 WISP1O95388 367 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 DEFB135Q30KP9 77 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 SPTSSBQ8NFR3 76 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 TSC2P49815 1807 aa9.52□□□□□ -0.89
CACNA1C-219ENST00000399649 C5orf56Q8N8D9 126 aa9.51□□□□□ -0.89
CACNA1C-219ENST00000399649 DEFB4AO15263 64 aa9.51□□□□□ -0.89
CACNA1C-219ENST00000399649 MED14OSP0DP75 135 aa9.51□□□□□ -0.89
CACNA1C-219ENST00000399649 MIR7-3HGQ8N6C7 128 aa9.51□□□□□ -0.89
CACNA1C-219ENST00000399649 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
CACNA1C-219ENST00000399649 TEX22C9J3V5 150 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 RITA1Q96K30 269 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 HEATR1Q9H583 2144 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 KIR2DL5BA0A0G2JN68 375 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 KIR2DL5BA0A0G2JPC4 375 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 KIR2DL5AQ8N109 375 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 UPK3BQ9BT76 320 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 TET1Q8NFU7 2136 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 KIR2DL5BQ8NHK3 375 aa9.5□□□□□ -0.89
CACNA1C-219ENST00000399649 WI2-2373I1.2A0A1W2PRP0 233 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 E9PLD3 99 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 K7EIM0 57 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 GRNP28799 593 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 BLCAPP62952 87 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 GTSF1Q8WW33 167 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 FOXI1Q12951 378 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 MSRB1Q9NZV6 116 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 HIGD1BQ9P298 99 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 AHCTF1Q8WYP5 2266 aa9.49□□□□□ -0.89
CACNA1C-219ENST00000399649 TNRC6BQ9UPQ9 1833 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 USP17L23D6RBM5 183 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 BPY2O14599 106 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 NFE4Q86UQ8 179 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 MYLKQ15746 1914 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 K7EMT4 169 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 IGLV3-1P01715 115 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 NCKAP5O14513 1909 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 PIP4P1Q86T03 277 aa9.48□□□□□ -0.89
CACNA1C-219ENST00000399649 H3BT86 120 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms