RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ABCA1O95477 2261 aa11.09□□□□□ -0.63
PCDHA11-201ENST00000398640 FAM231DQ6ZW35 169 aa11.09□□□□□ -0.63
PCDHA11-201ENST00000398640 AGPAT4-IT1Q9H0P7 198 aa11.09□□□□□ -0.63
PCDHA11-201ENST00000398640 IGLC7A0M8Q6 106 aa11.08□□□□□ -0.63
PCDHA11-201ENST00000398640 IGHG4P01861 327 aa11.08□□□□□ -0.63
PCDHA11-201ENST00000398640 EGR2P11161 476 aaPredicted RBP11.08□□□□□ -0.63
PCDHA11-201ENST00000398640 MAJINQ3KP22 176 aa11.08□□□□□ -0.63
PCDHA11-201ENST00000398640 J3QQQ9 107 aa11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 K7EN84 100 aa11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 MRPL23Q16540 153 aaKnown RBP11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 BOD1L2Q8IYS8 172 aa11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 TRAV13-2A0A0B4J235 113 aa11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 RS1O15537 224 aa11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 INAFM2P0DMQ5 153 aa11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 DKK2Q9UBU2 259 aa11.08□□□□□ -0.64
PCDHA11-201ENST00000398640 Q6ZWC4 215 aa11.07□□□□□ -0.64
PCDHA11-201ENST00000398640 CAMK2N2Q96S95 79 aa11.07□□□□□ -0.64
PCDHA11-201ENST00000398640 PYGO2Q9BRQ0 406 aa11.07□□□□□ -0.64
PCDHA11-201ENST00000398640 COX11Q9Y6N1 276 aa11.07□□□□□ -0.64
PCDHA11-201ENST00000398640 IGHV7-81A0A0B4J1V7 117 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 LTAP01374 205 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 CARD19Q96LW7 228 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 WNK2Q9Y3S1 2297 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 MYCNOSP40205 109 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 ZNF124Q15973 351 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 Q9H8V8 135 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 HEATR5AQ86XA9 2040 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 GATA1P15976 413 aaPredicted RBP11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 F8VRH5 84 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 CEND1Q8N111 149 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 ATP6V0E2Q8NHE4 81 aa11.06□□□□□ -0.64
PCDHA11-201ENST00000398640 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 PRO1854Q9UHT4 67 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 NBASA2RRP1 2371 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 Q8NFD4 153 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 IGHV4-28A0A0C4DH34 117 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 C5orf56Q8N8D9 126 aa11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
PCDHA11-201ENST00000398640 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 LGALS9CQ6DKI2 356 aa11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 ZNF106Q9H2Y7 1883 aaKnown RBP11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 K7EQD1 137 aa11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 SIRPDQ9H106 197 aa11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 KMT2EQ8IZD2 1858 aa11.04□□□□□ -0.64
PCDHA11-201ENST00000398640 SRSF2Q01130 221 aaKnown RBP11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 C20orf144Q9BQM9 153 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 FGF23Q9GZV9 251 aaPredicted RBP11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 ETDCA0A1B0GVM5 59 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 FANCD2OSQ96PS1 177 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 GTF3C1Q12789 2109 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 C9orf118A6NHY6 69 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 IGLL1P15814 213 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 AMTNQ6UX39 209 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 NPBQ8NG41 125 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 PROP1O75360 226 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 C4orf3Q8WVX3 66 aa11.03□□□□□ -0.64
PCDHA11-201ENST00000398640 SLC25A29Q8N8R3 303 aa11.02□□□□□ -0.64
PCDHA11-201ENST00000398640 C11orf52Q96A22 123 aa11.02□□□□□ -0.64
PCDHA11-201ENST00000398640 COX8AP10176 69 aa11.02□□□□□ -0.64
PCDHA11-201ENST00000398640 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.64
PCDHA11-201ENST00000398640 UBE2AP49459 152 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 PRR20EP86478 221 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 PRR20CP86479 221 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 PRR20DP86480 221 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 PRR20BP86481 221 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 PRR20AP86496 221 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 C15orf53Q8NAA6 179 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 DOCK11Q5JSL3 2073 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 C2orf70A6NJV1 201 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 SHISA2Q6UWI4 295 aa11.02□□□□□ -0.65
PCDHA11-201ENST00000398640 C10orf142B7Z368 130 aa11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 IGLC2P0DOY2 106 aa11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 IGLC3P0DOY3 106 aa11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 DEFB125Q8N687 156 aa11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 RNF183Q96D59 192 aa11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 LMO4P61968 165 aa11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 Q8N7P7 452 aa11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 TNFRSF13BO14836 293 aaPredicted RBP11.01□□□□□ -0.65
PCDHA11-201ENST00000398640 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 HHLA3Q9XRX5 114 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 OTOGLQ3ZCN5 2332 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 ETDBQ3ZM63 59 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 NDUFA11Q86Y39 141 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 Q8N9W7 124 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 UTF1Q5T230 341 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 ZNF493Q6ZR52 646 aa11□□□□□ -0.65
PCDHA11-201ENST00000398640 BDP1A6H8Y1 2624 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 RBAKDNA6NC62 111 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 BVES-AS1Q5T3Y7 98 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 H3BMG7 143 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 COL5A1P20908 1838 aaPredicted RBP10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 I3L2K1 104 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 PTPRQQ9UMZ3 2332 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 COX7A2LO14548 114 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
PCDHA11-201ENST00000398640 C10orf91Q5T1B1 145 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms