RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 ZNF407Q9C0G0 2248 aa9.19□□□□□ -0.94
TMF1-201ENST00000398559 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
TMF1-201ENST00000398559 IGHV4-59P01825 116 aa9.19□□□□□ -0.94
TMF1-201ENST00000398559 PRB2P02812 416 aaPredicted RBP9.19□□□□□ -0.94
TMF1-201ENST00000398559 DEFB112Q30KQ8 113 aa9.19□□□□□ -0.94
TMF1-201ENST00000398559 SPTBN1Q01082 2364 aaKnown RBP9.19□□□□□ -0.94
TMF1-201ENST00000398559 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 IGLV2-23P01705 113 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 PATE2Q6UY27 113 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 GTSF1Q8WW33 167 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 Q9HAA7 133 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 K7EQD1 137 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 RNASE8Q8TDE3 154 aaKnown RBP9.18□□□□□ -0.94
TMF1-201ENST00000398559 NCKAP5O14513 1909 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 A0A1B0GX51 115 aa9.18□□□□□ -0.94
TMF1-201ENST00000398559 LHBP01229 141 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 SMIM20Q8N5G0 67 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 DAND5Q8N907 189 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 FAM236AA0A1B0GUQ0 79 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 FAM236BA0A1B0GV22 79 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 K7EIM0 57 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 CHD3Q12873 2000 aaKnown RBP9.17□□□□□ -0.94
TMF1-201ENST00000398559 SLURP1P55000 103 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 NPBQ8NG41 125 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 IGLV10-54A0A075B6I4 117 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 CCL24O00175 119 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 TAX1BP3O14907 124 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 RPL39P62891 51 aaKnown RBP9.17□□□□□ -0.94
TMF1-201ENST00000398559 TTTY13Q9BZ97 58 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 VPREB3Q9UKI3 123 aa9.17□□□□□ -0.94
TMF1-201ENST00000398559 FUSP35637 526 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMF1-201ENST00000398559 LINC01620Q4KN68 170 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 TEN1Q86WV5 123 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 CENPVL3A0A0U1RRI6 287 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 HIST2H2BCQ6DN03 193 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 DOPEY2Q9Y3R5 2298 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 ANAPC1Q9H1A4 1944 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 ETDCA0A1B0GVM5 59 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 H0YGX0 51 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 ATOX1O00244 68 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 GYPEP15421 78 aa9.16□□□□□ -0.94
TMF1-201ENST00000398559 C1orf43Q9BWL3 253 aa9.15□□□□□ -0.94
TMF1-201ENST00000398559 IGLV11-55A0A075B6I3 123 aa9.15□□□□□ -0.94
TMF1-201ENST00000398559 PSMB8P28062 276 aa9.15□□□□□ -0.94
TMF1-201ENST00000398559 TOMM6Q96B49 74 aa9.15□□□□□ -0.94
TMF1-201ENST00000398559 AJUBAQ96IF1 538 aa9.15□□□□□ -0.94
TMF1-201ENST00000398559 DAZ2Q13117 558 aaKnown RBP9.15□□□□□ -0.95
TMF1-201ENST00000398559 C16orf54Q6UWD8 224 aa9.15□□□□□ -0.95
TMF1-201ENST00000398559 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.95
TMF1-201ENST00000398559 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.95
TMF1-201ENST00000398559 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.95
TMF1-201ENST00000398559 CLPSL1A2RUU4 121 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 NCR3O14931 201 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 FOXI1Q12951 378 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 KRTAP27-1Q3LI81 207 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 CAMK2N2Q96S95 79 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 HIGD1BQ9P298 99 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 ABCA1O95477 2261 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 FAM167A-AS1Q96KT0 104 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 COX7A2LO14548 114 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 IGKV1-17P01599 117 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 GRNP28799 593 aaKnown RBP9.14□□□□□ -0.95
TMF1-201ENST00000398559 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 CTSGP08311 255 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 CLEC2BQ92478 149 aa9.14□□□□□ -0.95
TMF1-201ENST00000398559 ATP6V0E2Q8NHE4 81 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
TMF1-201ENST00000398559 DKK4Q9UBT3 224 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 LGALS9O00182 355 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 TMEM61Q8N0U2 210 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 IGHV3-30P01768 117 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 IGHV3-33P01772 117 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 IGHV3-30-3P0DP02 117 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 IGHV3-30-5P0DP03 117 aa9.13□□□□□ -0.95
TMF1-201ENST00000398559 TNRC6AQ8NDV7 1962 aaKnown RBP9.12□□□□□ -0.95
TMF1-201ENST00000398559 WI2-2373I1.2A0A1W2PRP0 233 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 IGHV4-38-2P0DP08 117 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 E9PLD3 99 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 Q8N1Y9 231 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 RNF152Q8N8N0 203 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 G3V4G9 280 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 CHKB-CPT1BH3BT56 60 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 FRMD6-AS1P0C7T7 363 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 ROS1P08922 2347 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 PKDREJQ9NTG1 2253 aa9.12□□□□□ -0.95
TMF1-201ENST00000398559 NREPQ16612 68 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 USF3Q68DE3 2245 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 TRBV10-2A0A0K0K1G8 114 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 NDUFC2O95298 119 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 J3KT08 172 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 COL6A6A6NMZ7 2263 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 BLCAPP62952 87 aa9.11□□□□□ -0.95
TMF1-201ENST00000398559 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms