RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 TINCRA0A1B0GVN0 87 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 LOXL1Q08397 574 aaPredicted RBP11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 PTH2Q96A98 100 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 TP53TG3Q9ULZ0 132 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 ODF1Q14990 250 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 NXPH4O95158 308 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 LHBP01229 141 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 DEFB130BP0DP73 79 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 DEFB130AP0DP74 79 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 RBX1P62877 108 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
SH3KBP1-205ENST00000397821 IGLV2-8P01709 118 aa11.27□□□□□ -0.6
SH3KBP1-205ENST00000397821 P0C879 139 aa11.27□□□□□ -0.6
SH3KBP1-205ENST00000397821 SPANXDQ9BXN6 97 aa11.27□□□□□ -0.6
SH3KBP1-205ENST00000397821 PRSS47A8MTI9 375 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 TRAV12-1A0A0B4J245 112 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 IGHV1-69DA0A0B4J2H0 117 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 A0A1B0GXF2 115 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 C19orf71A6NCJ1 209 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 SS18Q15532 418 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
SH3KBP1-205ENST00000397821 OBSL1O75147 1896 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 PROP1O75360 226 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 CTRLP40313 264 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 LINC01620Q4KN68 170 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 LINC00322Q6ZN03 302 aaPredicted RBP11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 MUSTN1Q8IVN3 82 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 CFHR3Q02985 330 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 PRSS33Q8NF86 280 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
SH3KBP1-205ENST00000397821 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
SH3KBP1-205ENST00000397821 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
SH3KBP1-205ENST00000397821 BRWD1-AS2P59051 145 aa11.25□□□□□ -0.61
SH3KBP1-205ENST00000397821 MYO9AB2RTY4 2548 aa11.25□□□□□ -0.61
SH3KBP1-205ENST00000397821 RHOHQ15669 191 aa11.24□□□□□ -0.61
SH3KBP1-205ENST00000397821 C3orf56Q8N813 242 aa11.24□□□□□ -0.61
SH3KBP1-205ENST00000397821 PRAC2D3DTV9 90 aa11.24□□□□□ -0.61
SH3KBP1-205ENST00000397821 Q9H8V8 135 aa11.24□□□□□ -0.61
SH3KBP1-205ENST00000397821 TRAV13-2A0A0B4J235 113 aa11.24□□□□□ -0.61
SH3KBP1-205ENST00000397821 IGHV1-69P01742 117 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 CTSGP08311 255 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 HERVK_113P63121 156 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 TCTEX1D4Q5JR98 221 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
SH3KBP1-205ENST00000397821 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
SH3KBP1-205ENST00000397821 MRPL53Q96EL3 112 aaKnown RBP11.22□□□□□ -0.61
SH3KBP1-205ENST00000397821 E9PLD3 99 aa11.22□□□□□ -0.61
SH3KBP1-205ENST00000397821 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.22□□□□□ -0.61
SH3KBP1-205ENST00000397821 IGKV2-29A2NJV5 120 aaPredicted RBP11.22□□□□□ -0.61
SH3KBP1-205ENST00000397821 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.61
SH3KBP1-205ENST00000397821 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.61
SH3KBP1-205ENST00000397821 IGLV11-55A0A075B6I3 123 aa11.21□□□□□ -0.61
SH3KBP1-205ENST00000397821 BUB3O43684 328 aa11.21□□□□□ -0.62
SH3KBP1-205ENST00000397821 CUL9Q8IWT3 2517 aa11.21□□□□□ -0.62
SH3KBP1-205ENST00000397821 CRLF1O75462 422 aa11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 SRSF2Q01130 221 aaKnown RBP11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 RNF114Q9Y508 228 aa11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 C11orf86A6NJI1 115 aa11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 IGFL3Q6UXB1 125 aa11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 BAALCQ8WXS3 180 aa11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
SH3KBP1-205ENST00000397821 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
SH3KBP1-205ENST00000397821 ACYP1P07311 99 aa11.19□□□□□ -0.62
SH3KBP1-205ENST00000397821 ICOSQ9Y6W8 199 aa11.19□□□□□ -0.62
SH3KBP1-205ENST00000397821 IGHV7-81A0A0B4J1V7 117 aa11.19□□□□□ -0.62
SH3KBP1-205ENST00000397821 MSMBP08118 114 aa11.18□□□□□ -0.62
SH3KBP1-205ENST00000397821 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
SH3KBP1-205ENST00000397821 IGLV2-23P01705 113 aa11.18□□□□□ -0.62
SH3KBP1-205ENST00000397821 DSCR9P59020 149 aa11.18□□□□□ -0.62
SH3KBP1-205ENST00000397821 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
SH3KBP1-205ENST00000397821 RNF183Q96D59 192 aa11.18□□□□□ -0.62
SH3KBP1-205ENST00000397821 HOXD3P31249 432 aaPredicted RBP11.17□□□□□ -0.62
SH3KBP1-205ENST00000397821 PCDH15Q96QU1 1955 aa11.17□□□□□ -0.62
SH3KBP1-205ENST00000397821 DAND5Q8N907 189 aa11.17□□□□□ -0.62
SH3KBP1-205ENST00000397821 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
SH3KBP1-205ENST00000397821 DKK4Q9UBT3 224 aa11.17□□□□□ -0.62
SH3KBP1-205ENST00000397821 CRYGCP07315 174 aa11.17□□□□□ -0.62
SH3KBP1-205ENST00000397821 WI2-2373I1.2A0A1W2PRP0 233 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 Q6ZUT4 128 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 GNLYP22749 145 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 RBM3P98179 157 aaKnown RBP11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 MSMPQ1L6U9 139 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 ATP6V0E2Q8NHE4 81 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 TOMM6Q96B49 74 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 IGKV3D-7A0A0C4DH55 119 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 MT-ATP8P03928 68 aa11.16□□□□□ -0.62
SH3KBP1-205ENST00000397821 MUC6Q6W4X9 2439 aa11.15□□□□□ -0.62
SH3KBP1-205ENST00000397821 TANC2Q9HCD6 1990 aa11.15□□□□□ -0.62
SH3KBP1-205ENST00000397821 TRBV6-1A0A0K0K1D8 114 aa11.15□□□□□ -0.62
SH3KBP1-205ENST00000397821 TRBV10-2A0A0K0K1G8 114 aa11.15□□□□□ -0.62
SH3KBP1-205ENST00000397821 DEFB1P60022 68 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 391 ms