RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 LINC01549A6NIU2 74 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 INS-IGF2F8WCM5 200 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 K7ENP7 123 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 NPYP01303 97 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 SCGB1C2P0DMR2 95 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 RNF182Q8N6D2 247 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 CREBBPQ92793 2442 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 IGKV3-7A0A075B6H7 116 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 TRAV40A0A0B4J280 105 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 TRBV6-1A0A0K0K1D8 114 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 A0A1W2PPR1 153 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 LINC01548A6NM66 108 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 ZFP36P26651 326 aaKnown RBP3.89□□□□□ -1.79
SSR1-202ENST00000397511 SIGLEC15Q6ZMC9 328 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 VMO1Q7Z5L0 202 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 SBSPONQ8IVN8 264 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 OTORQ9NRC9 128 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 SPRY2O43597 315 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 TIRAPP58753 221 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 UBE2D3P61077 147 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 UBE2D2P62837 147 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 ERCC8Q13216 396 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 LYZL1Q6UWQ5 148 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 ZFP2Q6ZN57 461 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 TIMD4Q96H15 378 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 AAMDCQ9H7C9 122 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
SSR1-202ENST00000397511 MSRB1Q9NZV6 116 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 FAM208BQ5VWN6 2430 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 SORL1Q92673 2214 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 G3V318 75 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 ORM1P02763 201 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 PLNP26678 52 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 ADORA2A-AS1P86434 159 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 Q6ZQT7 251 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 TMEM219Q86XT9 240 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 C8orf31Q8N9H6 132 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 DEFB104AQ8WTQ1 72 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 DNAJC30Q96LL9 226 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 FANCD2OSQ96PS1 177 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 SHANK2-AS3Q9BTD1 123 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 UBTD1Q9HAC8 227 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 MDFICQ9P1T7 246 aa3.88□□□□□ -1.79
SSR1-202ENST00000397511 ZNF80P51504 273 aaPredicted RBP3.87□□□□□ -1.79
SSR1-202ENST00000397511 MYOZ3Q8TDC0 251 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 TMEM190Q8WZ59 177 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 C21orf62Q9NYP8 219 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 MRPL35Q9NZE8 188 aaKnown RBP3.87□□□□□ -1.79
SSR1-202ENST00000397511 PKD1L2Q7Z442 2459 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 LY6LH3BQJ8 138 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 H3BRN7 92 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 ZNF561-AS1K7EIQ3 104 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 CRLF1O75462 422 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 TCL1BO95988 128 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 TMEM78Q5T7P6 136 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 OR11H6Q8NGC7 330 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 RASL10AQ92737 203 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 SETD2Q9BYW2 2564 aaPredicted RBP3.87□□□□□ -1.79
SSR1-202ENST00000397511 TLN2Q9Y4G6 2542 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 TRAV8-4A0A0B4J246 113 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 PRAC2D3DTV9 90 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 SH2D1AO60880 128 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 EGR2P11161 476 aaPredicted RBP3.87□□□□□ -1.79
SSR1-202ENST00000397511 UBE2D1P51668 147 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 MFAP4P55083 255 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 DEFB1P60022 68 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 SRSF9Q13242 221 aaKnown RBP eCLIP3.87□□□□□ -1.79
SSR1-202ENST00000397511 C15orf32Q32M92 178 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 CLEC19AQ6UXS0 136 aa3.87□□□□□ -1.79
SSR1-202ENST00000397511 SMIM9A6NGZ8 99 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 F8W735 103 aaPredicted RBP3.86□□□□□ -1.79
SSR1-202ENST00000397511 SLC25A20O43772 301 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 NDUFA3O95167 84 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 CTSGP08311 255 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 HOXB4P17483 251 aaPredicted RBP3.86□□□□□ -1.79
SSR1-202ENST00000397511 BRD3OSQ6XYD6 125 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 LRRC75A-AS1Q8N1F1 130 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 C15orf53Q8NAA6 179 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 USP9XQ93008 2570 aaPredicted RBP3.86□□□□□ -1.79
SSR1-202ENST00000397511 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 GATA1P15976 413 aaPredicted RBP3.86□□□□□ -1.79
SSR1-202ENST00000397511 C4orf48Q5BLP8 95 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 ACACBO00763 2458 aa3.86□□□□□ -1.79
SSR1-202ENST00000397511 IGLV11-55A0A075B6I3 123 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 ATP6V0E1O15342 81 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 LGALS1P09382 135 aaKnown RBP3.85□□□□□ -1.79
SSR1-202ENST00000397511 MRPL23Q16540 153 aaKnown RBP3.85□□□□□ -1.79
SSR1-202ENST00000397511 BPESC1Q9GZL8 116 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 SMAD5-AS1Q9Y6J3 95 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 ZNF469Q96JG9 3925 aaPredicted RBP3.85□□□□□ -1.79
SSR1-202ENST00000397511 AKAP9Q99996 3911 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 IGHV7-81A0A0B4J1V7 117 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 TRAV2A0A0B4J234 112 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 TRAV26-2A0A0B4J265 109 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 C9JAW5 83 aa3.85□□□□□ -1.79
SSR1-202ENST00000397511 MRPS12O15235 138 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms