RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
RAPGEF4-201ENST00000397081 U3KQK5 164 aa11.31□□□□□ -0.6
RAPGEF4-201ENST00000397081 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 F8W735 103 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 Q8N9W7 124 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 JPT2Q9H910 190 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 CKS1BP61024 79 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 OR11H6Q8NGC7 330 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 TP53TG1Q9Y2A0 90 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 CDSNQ15517 529 aa11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 SPAG8Q99932 426 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF4-201ENST00000397081 LY6LH3BQJ8 138 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 NPBQ8NG41 125 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 CCDC168Q8NDH2 2452 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 TRBV12-3P01733 135 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 C1orf122Q6ZSJ8 110 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 RPL39P62891 51 aaKnown RBP11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 RRN3P1Q2M238 152 aa11.29□□□□□ -0.6
RAPGEF4-201ENST00000397081 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 M0R1W7 72 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 F8W1H4 67 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 ZNF688P0C7X2 276 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 SPOCK3Q9BQ16 436 aa11.28□□□□□ -0.6
RAPGEF4-201ENST00000397081 IGHV4-39P01824 125 aa11.27□□□□□ -0.6
RAPGEF4-201ENST00000397081 ZFP2Q6ZN57 461 aa11.27□□□□□ -0.6
RAPGEF4-201ENST00000397081 FAM110DQ8TAY7 271 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF4-201ENST00000397081 ADARB2-AS1A8MUL3 147 aa11.27□□□□□ -0.61
RAPGEF4-201ENST00000397081 UNQ9165/PRO28630Q6UXU0 137 aa11.27□□□□□ -0.61
RAPGEF4-201ENST00000397081 OVOL3O00110 214 aa11.27□□□□□ -0.61
RAPGEF4-201ENST00000397081 IGHG4P01861 327 aa11.27□□□□□ -0.61
RAPGEF4-201ENST00000397081 SPINK8P0C7L1 97 aa11.27□□□□□ -0.61
RAPGEF4-201ENST00000397081 DLX4Q92988 240 aaPredicted RBP11.27□□□□□ -0.61
RAPGEF4-201ENST00000397081 PRR9Q5T870 116 aa11.26□□□□□ -0.61
RAPGEF4-201ENST00000397081 PLEKHB2Q96CS7 222 aa11.26□□□□□ -0.61
RAPGEF4-201ENST00000397081 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
RAPGEF4-201ENST00000397081 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
RAPGEF4-201ENST00000397081 LRRK2Q5S007 2527 aa11.26□□□□□ -0.61
RAPGEF4-201ENST00000397081 A0A0U1RRA0 63 aa11.26□□□□□ -0.61
RAPGEF4-201ENST00000397081 GNLYP22749 145 aa11.26□□□□□ -0.61
RAPGEF4-201ENST00000397081 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 OPRPNQ99935 248 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 RHPN1-AS1Q9BWJ2 59 aa11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 HIGD1BQ9P298 99 aa11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 LGALS1P09382 135 aaKnown RBP11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
RAPGEF4-201ENST00000397081 NPFFO15130 113 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 MINOS1Q5TGZ0 78 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 KLK9Q9UKQ9 250 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 MINOS1-NBL1R4GNA1 71 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 E9PLD3 99 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 LYRM7Q5U5X0 104 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 C9orf139Q6ZV77 190 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 GATD1Q8NB37 220 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 NRACQ8N912 160 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
RAPGEF4-201ENST00000397081 H3BUX3 64 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 C9JAW5 83 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 TM2D2Q9BX73 214 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 ZFAND3Q9H8U3 227 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 ZNF462Q96JM2 2506 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 SDHAF1A6NFY7 115 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 RASL10AQ92737 203 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 ATP6V0BQ99437 205 aa11.22□□□□□ -0.61
RAPGEF4-201ENST00000397081 IGHV7-4-1A0A0J9YVY3 117 aa11.21□□□□□ -0.61
RAPGEF4-201ENST00000397081 C11orf86A6NJI1 115 aa11.21□□□□□ -0.61
RAPGEF4-201ENST00000397081 A8MWV9 139 aa11.21□□□□□ -0.61
RAPGEF4-201ENST00000397081 TMEM95Q3KNT9 176 aa11.21□□□□□ -0.61
RAPGEF4-201ENST00000397081 LY6G5BQ8NDX9 201 aa11.21□□□□□ -0.61
RAPGEF4-201ENST00000397081 KNCNA6PVL3 124 aa11.21□□□□□ -0.62
RAPGEF4-201ENST00000397081 SPXQ9BT56 116 aa11.21□□□□□ -0.62
RAPGEF4-201ENST00000397081 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.62
RAPGEF4-201ENST00000397081 DCHS2Q6V1P9 2916 aa11.2□□□□□ -0.62
RAPGEF4-201ENST00000397081 UBE2E1P51965 193 aa11.2□□□□□ -0.62
RAPGEF4-201ENST00000397081 BLCAPP62952 87 aa11.2□□□□□ -0.62
RAPGEF4-201ENST00000397081 ODF3BA8MYP8 253 aa11.19□□□□□ -0.62
RAPGEF4-201ENST00000397081 ADORA2A-AS1P86434 159 aa11.19□□□□□ -0.62
RAPGEF4-201ENST00000397081 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
RAPGEF4-201ENST00000397081 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
RAPGEF4-201ENST00000397081 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
RAPGEF4-201ENST00000397081 NOTCH2Q04721 2471 aa11.19□□□□□ -0.62
RAPGEF4-201ENST00000397081 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
RAPGEF4-201ENST00000397081 OVOL1O14753 267 aa11.18□□□□□ -0.62
RAPGEF4-201ENST00000397081 MOB4Q9Y3A3 225 aa11.18□□□□□ -0.62
RAPGEF4-201ENST00000397081 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
RAPGEF4-201ENST00000397081 OOSP1A8MZH6 123 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms