RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 NCOR1P1Q9H4R4 102 aa13.54□□□□□ -0.24
MCF2L-208ENST00000397030 USF3Q68DE3 2245 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 DKK2Q9UBU2 259 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 IGLC7A0M8Q6 106 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 PRO1854Q9UHT4 67 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 FAM231BA6NCW3 169 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 COLCA2A8K830 154 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 ZNF524Q96C55 264 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 C20orf78Q9BR46 151 aa13.53□□□□□ -0.24
MCF2L-208ENST00000397030 CACNA1DQ01668 2161 aa13.52□□□□□ -0.24
MCF2L-208ENST00000397030 DAND5Q8N907 189 aa13.52□□□□□ -0.24
MCF2L-208ENST00000397030 PRORYQ9H606 182 aa13.52□□□□□ -0.24
MCF2L-208ENST00000397030 BVES-AS1Q5T3Y7 98 aa13.52□□□□□ -0.24
MCF2L-208ENST00000397030 BAALC-AS2P0C853 105 aa13.52□□□□□ -0.25
MCF2L-208ENST00000397030 NDUFA11Q86Y39 141 aa13.52□□□□□ -0.25
MCF2L-208ENST00000397030 CEND1Q8N111 149 aa13.52□□□□□ -0.25
MCF2L-208ENST00000397030 CT83Q5H943 113 aa13.52□□□□□ -0.25
MCF2L-208ENST00000397030 Q8N1Y9 231 aa13.52□□□□□ -0.25
MCF2L-208ENST00000397030 C19orf84I3L1E1 186 aa13.52□□□□□ -0.25
MCF2L-208ENST00000397030 DAZAP2Q15038 168 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-208ENST00000397030 SMIM27A0A1W2PRY6 76 aa13.51□□□□□ -0.25
MCF2L-208ENST00000397030 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
MCF2L-208ENST00000397030 PTPRDP23468 1912 aa13.51□□□□□ -0.25
MCF2L-208ENST00000397030 TRAV26-1A0A087WT03 109 aa13.51□□□□□ -0.25
MCF2L-208ENST00000397030 A0A087WZ39 114 aa13.51□□□□□ -0.25
MCF2L-208ENST00000397030 IGKV1-17P01599 117 aa13.51□□□□□ -0.25
MCF2L-208ENST00000397030 SPAG11BQ08648 103 aa13.51□□□□□ -0.25
MCF2L-208ENST00000397030 GAGE12HA6NDE8 117 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 FHL1Q13642 323 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 CRYBA4P53673 196 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 DOCK10Q96BY6 2186 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 ETV2O00321 342 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-208ENST00000397030 CRYGDP07320 174 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 ZNF726P1Q15940 193 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 ZFP2Q6ZN57 461 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 RNF152Q8N8N0 203 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 F8VRH5 84 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 TSC2P49815 1807 aa13.5□□□□□ -0.25
MCF2L-208ENST00000397030 HERV-K104P63124 156 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 LY6G6DO95868 133 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 UBE2D1P51668 147 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 SND1-IT1Q9HBX3 110 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 Q8N9W7 124 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 V9GYV3 84 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 KMT2EQ8IZD2 1858 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 TRBV12-3P01733 135 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 IGHG2P01859 326 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
MCF2L-208ENST00000397030 PLXNA3P51805 1871 aa13.48□□□□□ -0.25
MCF2L-208ENST00000397030 C16orf54Q6UWD8 224 aa13.48□□□□□ -0.25
MCF2L-208ENST00000397030 ZNF843Q8N446 348 aa13.48□□□□□ -0.25
MCF2L-208ENST00000397030 A8MWP6 167 aa13.48□□□□□ -0.25
MCF2L-208ENST00000397030 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
MCF2L-208ENST00000397030 HIGD2AQ9BW72 106 aa13.48□□□□□ -0.25
MCF2L-208ENST00000397030 SPANXA1Q9NS26 97 aa13.48□□□□□ -0.25
MCF2L-208ENST00000397030 TRBV7-3A0A075B6L6 115 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 CTSGP08311 255 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 SEC61GP60059 68 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 TRBV20-1A0A075B6N2 111 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 C14orf177Q52M58 125 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 C11orf53Q8IXP5 236 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 RBAKDNA6NC62 111 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 IGHV4-31P0DP07 118 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 LINC00482Q8N8I6 264 aa13.47□□□□□ -0.25
MCF2L-208ENST00000397030 IGKV4-1P06312 121 aa13.46□□□□□ -0.25
MCF2L-208ENST00000397030 INSL3P51460 131 aa13.46□□□□□ -0.26
MCF2L-208ENST00000397030 RBM3P98179 157 aaKnown RBP13.46□□□□□ -0.26
MCF2L-208ENST00000397030 IGFL2Q6UWQ7 119 aa13.45□□□□□ -0.26
MCF2L-208ENST00000397030 PLXNA4Q9HCM2 1894 aa13.45□□□□□ -0.26
MCF2L-208ENST00000397030 CCL25O15444 150 aa13.45□□□□□ -0.26
MCF2L-208ENST00000397030 NREPQ16612 68 aa13.45□□□□□ -0.26
MCF2L-208ENST00000397030 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
MCF2L-208ENST00000397030 MYLKQ15746 1914 aa13.44□□□□□ -0.26
MCF2L-208ENST00000397030 CNOT1A5YKK6 2376 aaKnown RBP13.44□□□□□ -0.26
MCF2L-208ENST00000397030 FAM231DQ6ZW35 169 aa13.44□□□□□ -0.26
MCF2L-208ENST00000397030 CITED1Q99966 193 aa13.44□□□□□ -0.26
MCF2L-208ENST00000397030 LYL1P12980 280 aa13.44□□□□□ -0.26
MCF2L-208ENST00000397030 ACACAQ13085 2346 aa13.44□□□□□ -0.26
MCF2L-208ENST00000397030 SHISA2Q6UWI4 295 aa13.44□□□□□ -0.26
MCF2L-208ENST00000397030 I3L2K1 104 aa13.43□□□□□ -0.26
MCF2L-208ENST00000397030 ANKRD29Q8N6D5 301 aa13.43□□□□□ -0.26
MCF2L-208ENST00000397030 Q0VG73 95 aa13.43□□□□□ -0.26
MCF2L-208ENST00000397030 IGLV11-55A0A075B6I3 123 aa13.43□□□□□ -0.26
MCF2L-208ENST00000397030 A0A1B0GX51 115 aa13.43□□□□□ -0.26
MCF2L-208ENST00000397030 RSPO1Q2MKA7 263 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-208ENST00000397030 ZNF664Q8N3J9 261 aa13.43□□□□□ -0.26
MCF2L-208ENST00000397030 MAP6D1Q9H9H5 199 aa13.43□□□□□ -0.26
MCF2L-208ENST00000397030 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 FAM19A1Q7Z5A9 133 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 Q8N7P7 452 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 OPRPNQ99935 248 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-208ENST00000397030 PRAC2D3DTV9 90 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 LECT2O14960 151 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 RPL39P62891 51 aaKnown RBP13.42□□□□□ -0.26
MCF2L-208ENST00000397030 IGLC2P0DOY2 106 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 IGLC3P0DOY3 106 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 UBE2D4Q9Y2X8 147 aa13.42□□□□□ -0.26
MCF2L-208ENST00000397030 POLR3KQ9Y2Y1 108 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-208ENST00000397030 MP68P56378 58 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms