RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 C3orf36Q3SXR2 165 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 EXOC3-AS1Q8N2X6 119 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 TMEM86BQ8N661 226 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 C8orf31Q8N9H6 132 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 TMEM263Q8WUH6 116 aaKnown RBP7.48□□□□□ -1.21
CDRT1-204ENST00000395906 PRR25Q96S07 402 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 PRORYQ9H606 182 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 PKIGQ9Y2B9 76 aa7.48□□□□□ -1.21
CDRT1-204ENST00000395906 A0A0B4J2C4 111 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 H7C423 109 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 ENSAO43768 121 aaKnown RBP7.47□□□□□ -1.21
CDRT1-204ENST00000395906 LINC00336Q6ZUF6 198 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 SLC25A29Q8N8R3 303 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 RPUSD1Q9UJJ7 312 aaKnown RBP7.47□□□□□ -1.21
CDRT1-204ENST00000395906 CSMD2Q7Z408 3487 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 TRAV41A0A0B4J266 112 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 ELANEP08246 267 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 PFN2P35080 140 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 SPRR3Q9UBC9 169 aa7.47□□□□□ -1.21
CDRT1-204ENST00000395906 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.21
CDRT1-204ENST00000395906 ABCA4P78363 2273 aa7.46□□□□□ -1.21
CDRT1-204ENST00000395906 HIST1H4AP62805 103 aaKnown RBP7.46□□□□□ -1.21
CDRT1-204ENST00000395906 SHANK2-AS3Q9BTD1 123 aa7.46□□□□□ -1.21
CDRT1-204ENST00000395906 AGPAT4-IT1Q9H0P7 198 aa7.46□□□□□ -1.21
CDRT1-204ENST00000395906 TMEM14CQ9P0S9 112 aa7.46□□□□□ -1.21
CDRT1-204ENST00000395906 AKAP6Q13023 2319 aa7.46□□□□□ -1.21
CDRT1-204ENST00000395906 TRBV30A0A0K0K1B3 111 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 C17orf100A8MU93 164 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 J3QQQ9 107 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 SH2D1AO60880 128 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 Q1RN00 199 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 NEXN-AS1Q8NBZ9 246 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 KLHL30-AS1Q8NEE0 82 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 METRNQ9UJH8 293 aa7.46□□□□□ -1.22
CDRT1-204ENST00000395906 PKDREJQ9NTG1 2253 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 H7C2G1 150 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 C8orf49Q96NF6 230 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 DCTN5Q9BTE1 182 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 CTSZQ9UBR2 303 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 SSUH2Q9Y2M2 353 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 PLCE1Q9P212 2302 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 A0A096LPE4 126 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 A0A1W2PPZ6 126 aa7.45□□□□□ -1.22
CDRT1-204ENST00000395906 GATA1P15976 413 aaPredicted RBP7.45□□□□□ -1.22
CDRT1-204ENST00000395906 C1orf229Q6ZS94 237 aaPredicted RBP7.45□□□□□ -1.22
CDRT1-204ENST00000395906 TRGV5A0A0B4J1U4 118 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 LY6LH3BQJ8 138 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 Q6ZS46 218 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 C9orf85Q96MD7 179 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 NDUFA4L2Q9NRX3 87 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
CDRT1-204ENST00000395906 GRPP07492 148 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 SCGB3A1Q96QR1 104 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 DPH3P1Q9H4G8 78 aa7.44□□□□□ -1.22
CDRT1-204ENST00000395906 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
CDRT1-204ENST00000395906 WNT9BO14905 357 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 IGHV3-48P01763 117 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 CCL8P80075 99 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 UPK3BQ9BT76 320 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 CNFNQ9BYD5 112 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 MRPL36Q9P0J6 103 aaKnown RBP7.43□□□□□ -1.22
CDRT1-204ENST00000395906 HIVEP3Q5T1R4 2406 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 LOXL3P58215 753 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 HOXA4Q00056 320 aaPredicted RBP7.43□□□□□ -1.22
CDRT1-204ENST00000395906 SDIM1Q6ZPB5 146 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 CHD6Q8TD26 2715 aa7.43□□□□□ -1.22
CDRT1-204ENST00000395906 IGHV3-64DA0A0J9YX35 117 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 TRIAP1O43715 76 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 TFF1P04155 84 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 SAA2P0DJI9 122 aaPredicted RBP7.42□□□□□ -1.22
CDRT1-204ENST00000395906 IL17RELQ6ZVW7 336 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 MBD3L2Q8NHZ7 208 aaPredicted RBP7.42□□□□□ -1.22
CDRT1-204ENST00000395906 BEX4Q9NWD9 120 aaPredicted RBP7.42□□□□□ -1.22
CDRT1-204ENST00000395906 ZNF503-AS2A6NEH8 195 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 TIMM8AO60220 97 aaPredicted RBP7.42□□□□□ -1.22
CDRT1-204ENST00000395906 MRPL33O75394 65 aaKnown RBP7.42□□□□□ -1.22
CDRT1-204ENST00000395906 CD40P25942 277 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 IGFL2Q6UWQ7 119 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 SERP2Q8N6R1 65 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 KLF14Q8TD94 323 aaPredicted RBP7.42□□□□□ -1.22
CDRT1-204ENST00000395906 C10orf105Q8TEF2 133 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 TOMM6Q96B49 74 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 RNF125Q96EQ8 232 aa7.42□□□□□ -1.22
CDRT1-204ENST00000395906 TRBV19A0A075B6N1 114 aa7.41□□□□□ -1.22
CDRT1-204ENST00000395906 PLGLAQ15195 96 aa7.41□□□□□ -1.22
CDRT1-204ENST00000395906 SAA1P0DJI8 122 aaPredicted RBP7.41□□□□□ -1.22
CDRT1-204ENST00000395906 EGR2P11161 476 aaPredicted RBP7.41□□□□□ -1.22
CDRT1-204ENST00000395906 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
CDRT1-204ENST00000395906 KLRB1Q12918 225 aa7.41□□□□□ -1.22
CDRT1-204ENST00000395906 C1orf195Q5TG92 126 aa7.41□□□□□ -1.22
CDRT1-204ENST00000395906 COX8CQ7Z4L0 72 aa7.41□□□□□ -1.22
CDRT1-204ENST00000395906 NRACQ8N912 160 aa7.41□□□□□ -1.22
CDRT1-204ENST00000395906 CNEP1R1Q8N9A8 125 aa7.41□□□□□ -1.22
CDRT1-204ENST00000395906 FAM236DA0A1B0GTK5 79 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms