RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 F5H768 121 aa11.66□□□□□ -0.54
CXCL1-201ENST00000395761 ATP5G1P05496 136 aa11.66□□□□□ -0.54
CXCL1-201ENST00000395761 ADIRFQ15847 76 aa11.66□□□□□ -0.54
CXCL1-201ENST00000395761 ZNF575Q86XF7 245 aa11.66□□□□□ -0.54
CXCL1-201ENST00000395761 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
CXCL1-201ENST00000395761 MRPL16Q9NX20 251 aaKnown RBP11.66□□□□□ -0.54
CXCL1-201ENST00000395761 RYR3Q15413 4870 aa11.65□□□□□ -0.54
CXCL1-201ENST00000395761 DNAH1Q9P2D7 4330 aa11.65□□□□□ -0.54
CXCL1-201ENST00000395761 TMEM88Q6PEY1 159 aa11.65□□□□□ -0.54
CXCL1-201ENST00000395761 LINC00476Q8WZB0 136 aa11.65□□□□□ -0.54
CXCL1-201ENST00000395761 SFRP2Q96HF1 295 aa11.65□□□□□ -0.54
CXCL1-201ENST00000395761 B4DEV8 164 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 LY6G6CO95867 125 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 P01737 135 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 ORM1P02763 201 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 CXCL1P09341 107 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 TCTAP57738 103 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 ERVFC1-1P60608 527 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 DNLZQ5SXM8 178 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 NDUFAF3Q9BU61 184 aa11.64□□□□□ -0.55
CXCL1-201ENST00000395761 RNASE7Q9H1E1 156 aaKnown RBP11.64□□□□□ -0.55
CXCL1-201ENST00000395761 RYR2Q92736 4967 aa11.63□□□□□ -0.55
CXCL1-201ENST00000395761 TRGV2A0A075B6R0 118 aa11.63□□□□□ -0.55
CXCL1-201ENST00000395761 HOXA5P20719 270 aa11.63□□□□□ -0.55
CXCL1-201ENST00000395761 RPS20P60866 119 aaKnown RBP11.63□□□□□ -0.55
CXCL1-201ENST00000395761 LGALS9BQ3B8N2 356 aa11.63□□□□□ -0.55
CXCL1-201ENST00000395761 C15orf54Q8N8G6 183 aa11.63□□□□□ -0.55
CXCL1-201ENST00000395761 FAM210BQ96KR6 192 aa11.63□□□□□ -0.55
CXCL1-201ENST00000395761 SPXQ9BT56 116 aa11.63□□□□□ -0.55
CXCL1-201ENST00000395761 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
CXCL1-201ENST00000395761 CT83Q5H943 113 aa11.62□□□□□ -0.55
CXCL1-201ENST00000395761 OR2D3Q8NGH3 330 aa11.62□□□□□ -0.55
CXCL1-201ENST00000395761 OR10G8Q8NGN5 311 aa11.62□□□□□ -0.55
CXCL1-201ENST00000395761 C18orf15Q96N68 181 aa11.62□□□□□ -0.55
CXCL1-201ENST00000395761 RPP21Q9H633 154 aaKnown RBP11.62□□□□□ -0.55
CXCL1-201ENST00000395761 XKRY2A2RUG3 117 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 M0R036 132 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 PPP1R2P9O14990 202 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 IGHV3-53P01767 116 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 LGALS9CQ6DKI2 356 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 RASL10AQ92737 203 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 V9GYV3 84 aa11.61□□□□□ -0.55
CXCL1-201ENST00000395761 APOC3P02656 99 aa11.6□□□□□ -0.55
CXCL1-201ENST00000395761 MT-ND4LP03901 98 aa11.6□□□□□ -0.55
CXCL1-201ENST00000395761 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
CXCL1-201ENST00000395761 RPL19P84098 196 aaKnown RBP11.6□□□□□ -0.55
CXCL1-201ENST00000395761 SVBPQ8N300 66 aa11.6□□□□□ -0.55
CXCL1-201ENST00000395761 CLRN3Q8NCR9 226 aa11.6□□□□□ -0.55
CXCL1-201ENST00000395761 C9orf85Q96MD7 179 aa11.6□□□□□ -0.55
CXCL1-201ENST00000395761 A8MWL6 223 aa11.59□□□□□ -0.55
CXCL1-201ENST00000395761 M0R2P5 195 aa11.59□□□□□ -0.55
CXCL1-201ENST00000395761 RNF212Q495C1 297 aa11.59□□□□□ -0.55
CXCL1-201ENST00000395761 HYDINQ4G0P3 5121 aa11.59□□□□□ -0.55
CXCL1-201ENST00000395761 TRAV26-1A0A087WT03 109 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 TMSB15BA0A087X1C1 80 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 A0A0J9YY99 117 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 GRIFINA4D1Z8 144 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 FAM231BA6NCW3 169 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 SNAPINO95295 136 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 MED14OSP0DP75 135 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 ASIPP42127 132 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
CXCL1-201ENST00000395761 RHEBQ15382 184 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 POM121L12Q8N7R1 296 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
CXCL1-201ENST00000395761 CTDSP1Q9GZU7 261 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 GFRA4Q9GZZ7 299 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 VPS13DQ5THJ4 4388 aa11.58□□□□□ -0.56
CXCL1-201ENST00000395761 A0A087WWC5 75 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 C7orf77A4D0Y5 90 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 IGLC6P0CF74 106 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 ZNF479Q96JC4 524 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 SCRT2Q9NQ03 307 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 TMEM242Q9NWH2 141 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 IL36BQ9NZH7 164 aa11.57□□□□□ -0.56
CXCL1-201ENST00000395761 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
CXCL1-201ENST00000395761 SNAI2O43623 268 aa11.56□□□□□ -0.56
CXCL1-201ENST00000395761 NUDT3O95989 172 aa11.56□□□□□ -0.56
CXCL1-201ENST00000395761 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
CXCL1-201ENST00000395761 FHL2Q14192 279 aa11.56□□□□□ -0.56
CXCL1-201ENST00000395761 ZNF876PQ49A33 203 aa11.56□□□□□ -0.56
CXCL1-201ENST00000395761 PTH2Q96A98 100 aa11.56□□□□□ -0.56
CXCL1-201ENST00000395761 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
CXCL1-201ENST00000395761 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
CXCL1-201ENST00000395761 H3BVH4 76 aa11.55□□□□□ -0.56
CXCL1-201ENST00000395761 OR5AL1P0C617 328 aa11.55□□□□□ -0.56
CXCL1-201ENST00000395761 ARMS2P0C7Q2 107 aa11.55□□□□□ -0.56
CXCL1-201ENST00000395761 GZMBP10144 247 aa11.55□□□□□ -0.56
CXCL1-201ENST00000395761 C15orf53Q8NAA6 179 aa11.55□□□□□ -0.56
CXCL1-201ENST00000395761 MUC4Q99102 2169 aa11.54□□□□□ -0.56
CXCL1-201ENST00000395761 F2Z2F3 143 aa11.54□□□□□ -0.56
CXCL1-201ENST00000395761 WDR73Q6P4I2 378 aa11.54□□□□□ -0.56
CXCL1-201ENST00000395761 FER1L6-AS1Q8NA97 138 aa11.54□□□□□ -0.56
CXCL1-201ENST00000395761 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
CXCL1-201ENST00000395761 GTSF1Q8WW33 167 aa11.54□□□□□ -0.56
CXCL1-201ENST00000395761 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
CXCL1-201ENST00000395761 TRAV4A0A0B4J268 109 aa11.53□□□□□ -0.56
CXCL1-201ENST00000395761 P0DMU3 169 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms