RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 TRBV25-1A0A075B6N4 114 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 LINC01546A6NGU7 62 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 ZNF815PA8K554 130 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 CFHR3Q02985 330 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 SCGB3A1Q96QR1 104 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 APCP25054 2843 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 A0A1B0GW15 77 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 SH2D1AO60880 128 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 ATP5LO75964 103 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 BRI3O95415 125 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 GATA1P15976 413 aaPredicted RBP7.88□□□□□ -1.15
HIF1A-203ENST00000394997 TMEM170BQ5T4T1 132 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 FAM104BQ5XKR9 115 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 BOD1L2Q8IYS8 172 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 C5orf56Q8N8D9 126 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 MRPL35Q9NZE8 188 aaKnown RBP7.88□□□□□ -1.15
HIF1A-203ENST00000394997 F8W1H4 67 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 ZNF80P51504 273 aaPredicted RBP7.88□□□□□ -1.15
HIF1A-203ENST00000394997 LYPD1Q8N2G4 141 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 RNF125Q96EQ8 232 aa7.88□□□□□ -1.15
HIF1A-203ENST00000394997 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
HIF1A-203ENST00000394997 ZNF493Q6ZR52 646 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 EFNA4P52798 201 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 ZFAND6Q6FIF0 208 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 GLMPQ8WWB7 406 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 TMEM190Q8WZ59 177 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 PTH2Q96A98 100 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 BPESC1Q9GZL8 116 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 MSRB1Q9NZV6 116 aa7.87□□□□□ -1.15
HIF1A-203ENST00000394997 ANK2Q01484 3957 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 INSL3P51460 131 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 C12orf74Q32Q52 190 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 CEND1Q8N111 149 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 DLX4Q92988 240 aaPredicted RBP7.86□□□□□ -1.15
HIF1A-203ENST00000394997 CNFNQ9BYD5 112 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 SORL1Q92673 2214 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 TRAV26-2A0A0B4J265 109 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 IGLL5B9A064 214 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 HERVK_113P61574 105 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 PDE6HQ13956 83 aa7.86□□□□□ -1.15
HIF1A-203ENST00000394997 FAM110DQ8TAY7 271 aaPredicted RBP7.86□□□□□ -1.15
HIF1A-203ENST00000394997 NXT2Q9NPJ8 142 aaKnown RBP7.86□□□□□ -1.15
HIF1A-203ENST00000394997 A8MWV9 139 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 SOCS3O14543 225 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 TNFRSF6BO95407 300 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 GAGE2BQ13066 116 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 GAGE2EQ4V326 116 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 GAGE2DQ9UEU5 116 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 SAA4P35542 130 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 ECSCRQ19T08 205 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 CCDC144NLQ6NUI1 221 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 RAX2Q96IS3 184 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 FAM19A4Q96LR4 140 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 NACAE9PAV3 2078 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 IGKV2D-26A0A0A0MRZ7 120 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 TMEM78Q5T7P6 136 aa7.85□□□□□ -1.15
HIF1A-203ENST00000394997 KMT2BQ9UMN6 2715 aaPredicted RBP7.85□□□□□ -1.15
HIF1A-203ENST00000394997 IGHV3-64A0A075B6Q5 118 aa7.84□□□□□ -1.15
HIF1A-203ENST00000394997 IGLC6P0CF74 106 aa7.84□□□□□ -1.15
HIF1A-203ENST00000394997 FOXI2Q6ZQN5 318 aa7.84□□□□□ -1.15
HIF1A-203ENST00000394997 ATP6V0E1O15342 81 aa7.84□□□□□ -1.15
HIF1A-203ENST00000394997 BUB3O43684 328 aa7.84□□□□□ -1.15
HIF1A-203ENST00000394997 AVPP01185 164 aa7.84□□□□□ -1.15
HIF1A-203ENST00000394997 HLA-DMBP28068 263 aa7.84□□□□□ -1.15
HIF1A-203ENST00000394997 SRSF2Q01130 221 aaKnown RBP7.84□□□□□ -1.15
HIF1A-203ENST00000394997 FABP5P3A8MUU1 101 aa7.84□□□□□ -1.16
HIF1A-203ENST00000394997 RPL13AP40429 203 aaKnown RBP7.84□□□□□ -1.16
HIF1A-203ENST00000394997 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.16
HIF1A-203ENST00000394997 MGAM2Q2M2H8 2515 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 SPRY2O43597 315 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 HLA-DRB4P13762 266 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 ATP5J2P56134 94 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 Q6ZS46 218 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 SMIM20Q8N5G0 67 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 C11orf21Q9P2W6 132 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 HLA-DRB4X5D2U9 266 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 IGHV4-61A0A0C4DH41 118 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 PRSS29PA6NIE9 313 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 PRAC2D3DTV9 90 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 MFAP4P55083 255 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 NEGR1Q7Z3B1 354 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 C10orf105Q8TEF2 133 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 NIPBLQ6KC79 2804 aaeCLIP7.83□□□□□ -1.16
HIF1A-203ENST00000394997 ERCC8Q13216 396 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 Q6ZQT7 251 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 C3orf56Q8N813 242 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 PHLDA3Q9Y5J5 127 aa7.83□□□□□ -1.16
HIF1A-203ENST00000394997 C9JAW5 83 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 FGF6P10767 208 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 C8orf86Q6ZUL3 223 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 DNAH3Q8TD57 4116 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 SIVA1O15304 175 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 MT-ATP8P03928 68 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 FAM74A4Q5TZK3 123 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 HIST2H2BCQ6DN03 193 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 RNF183Q96D59 192 aa7.82□□□□□ -1.16
HIF1A-203ENST00000394997 FSHBP01225 129 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms