RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 UBTD1Q9HAC8 227 aa11.89□□□□□ -0.51
PTBP1-204ENST00000394601 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
PTBP1-204ENST00000394601 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
PTBP1-204ENST00000394601 CLEC3BP05452 202 aa11.88□□□□□ -0.51
PTBP1-204ENST00000394601 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
PTBP1-204ENST00000394601 PIFOQ8TCI5 191 aa11.88□□□□□ -0.51
PTBP1-204ENST00000394601 TRGV3P03979 118 aa11.87□□□□□ -0.51
PTBP1-204ENST00000394601 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
PTBP1-204ENST00000394601 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
PTBP1-204ENST00000394601 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
PTBP1-204ENST00000394601 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
PTBP1-204ENST00000394601 Q1RN00 199 aa11.87□□□□□ -0.51
PTBP1-204ENST00000394601 TTC32Q5I0X7 151 aa11.87□□□□□ -0.51
PTBP1-204ENST00000394601 C5orf56Q8N8D9 126 aa11.87□□□□□ -0.51
PTBP1-204ENST00000394601 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
PTBP1-204ENST00000394601 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
PTBP1-204ENST00000394601 CCDC179H3BU77 68 aa11.86□□□□□ -0.51
PTBP1-204ENST00000394601 GAGE5Q13069 117 aa11.86□□□□□ -0.51
PTBP1-204ENST00000394601 GAGE6Q13070 117 aa11.86□□□□□ -0.51
PTBP1-204ENST00000394601 ECSCRQ19T08 205 aa11.86□□□□□ -0.51
PTBP1-204ENST00000394601 Q6ZQT7 251 aa11.86□□□□□ -0.51
PTBP1-204ENST00000394601 U3KQE9 123 aa11.86□□□□□ -0.51
PTBP1-204ENST00000394601 FLNCQ14315 2725 aa11.86□□□□□ -0.51
PTBP1-204ENST00000394601 RNF182Q8N6D2 247 aa11.85□□□□□ -0.51
PTBP1-204ENST00000394601 DPF1Q92782 380 aa11.85□□□□□ -0.51
PTBP1-204ENST00000394601 NPFFO15130 113 aa11.85□□□□□ -0.51
PTBP1-204ENST00000394601 SLC25A16P16260 332 aa11.85□□□□□ -0.51
PTBP1-204ENST00000394601 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
PTBP1-204ENST00000394601 TM2D2Q9BX73 214 aa11.85□□□□□ -0.51
PTBP1-204ENST00000394601 IGHV4-39P01824 125 aa11.84□□□□□ -0.51
PTBP1-204ENST00000394601 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
PTBP1-204ENST00000394601 NACAE9PAV3 2078 aa11.84□□□□□ -0.51
PTBP1-204ENST00000394601 C9JAW5 83 aa11.84□□□□□ -0.51
PTBP1-204ENST00000394601 SPANXN1Q5VSR9 72 aa11.84□□□□□ -0.51
PTBP1-204ENST00000394601 C11orf21Q9P2W6 132 aa11.84□□□□□ -0.51
PTBP1-204ENST00000394601 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
PTBP1-204ENST00000394601 IGKV3-7A0A075B6H7 116 aa11.83□□□□□ -0.51
PTBP1-204ENST00000394601 M0R381 172 aa11.83□□□□□ -0.51
PTBP1-204ENST00000394601 GAGE2BQ13066 116 aa11.83□□□□□ -0.51
PTBP1-204ENST00000394601 GAGE2EQ4V326 116 aa11.83□□□□□ -0.51
PTBP1-204ENST00000394601 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.51
PTBP1-204ENST00000394601 PRO0461Q9UI25 63 aa11.83□□□□□ -0.51
PTBP1-204ENST00000394601 RBAKDNA6NC62 111 aa11.83□□□□□ -0.52
PTBP1-204ENST00000394601 LINC01546A6NGU7 62 aa11.83□□□□□ -0.52
PTBP1-204ENST00000394601 SNCGO76070 127 aa11.83□□□□□ -0.52
PTBP1-204ENST00000394601 TMEM78Q5T7P6 136 aa11.83□□□□□ -0.52
PTBP1-204ENST00000394601 MORN3Q6PF18 240 aaPredicted RBP11.83□□□□□ -0.52
PTBP1-204ENST00000394601 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
PTBP1-204ENST00000394601 MGPP08493 103 aa11.83□□□□□ -0.52
PTBP1-204ENST00000394601 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
PTBP1-204ENST00000394601 CRIP2P52943 208 aaPredicted RBP11.82□□□□□ -0.52
PTBP1-204ENST00000394601 IL17RELQ6ZVW7 336 aa11.82□□□□□ -0.52
PTBP1-204ENST00000394601 ANKRD29Q8N6D5 301 aa11.82□□□□□ -0.52
PTBP1-204ENST00000394601 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
PTBP1-204ENST00000394601 A8MWV9 139 aa11.82□□□□□ -0.52
PTBP1-204ENST00000394601 LINC01559Q495D7 138 aa11.82□□□□□ -0.52
PTBP1-204ENST00000394601 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
PTBP1-204ENST00000394601 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 IGKV3D-20A0A0C4DH25 116 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 TRBV7-9A0A0J9YWB2 115 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 PRADC1Q9BSG0 188 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 TCL1BO95988 128 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 HIGD1BQ9P298 99 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 PKD1L2Q7Z442 2459 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 CRLF1O75462 422 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 GNLYP22749 145 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 AGPAT4-IT1Q9H0P7 198 aa11.81□□□□□ -0.52
PTBP1-204ENST00000394601 AKAP9Q99996 3911 aa11.8□□□□□ -0.52
PTBP1-204ENST00000394601 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
PTBP1-204ENST00000394601 ATP5LO75964 103 aa11.8□□□□□ -0.52
PTBP1-204ENST00000394601 TSPAN13O95857 204 aa11.8□□□□□ -0.52
PTBP1-204ENST00000394601 NXT2Q9NPJ8 142 aaKnown RBP11.8□□□□□ -0.52
PTBP1-204ENST00000394601 GPHB5Q86YW7 130 aa11.79□□□□□ -0.52
PTBP1-204ENST00000394601 PPDPFLQ8WWR9 84 aa11.79□□□□□ -0.52
PTBP1-204ENST00000394601 LAGE3Q14657 143 aa11.79□□□□□ -0.52
PTBP1-204ENST00000394601 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
PTBP1-204ENST00000394601 IGSF10Q6WRI0 2623 aa11.79□□□□□ -0.52
PTBP1-204ENST00000394601 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
PTBP1-204ENST00000394601 FAM159AQ6UWV7 190 aa11.78□□□□□ -0.52
PTBP1-204ENST00000394601 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
PTBP1-204ENST00000394601 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
PTBP1-204ENST00000394601 NPC2P61916 151 aa11.78□□□□□ -0.52
PTBP1-204ENST00000394601 SPG11Q96JI7 2443 aa11.78□□□□□ -0.52
PTBP1-204ENST00000394601 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.52
PTBP1-204ENST00000394601 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.52
PTBP1-204ENST00000394601 ZNF688P0C7X2 276 aa11.77□□□□□ -0.52
PTBP1-204ENST00000394601 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.52
PTBP1-204ENST00000394601 SLC50A1Q9BRV3 221 aa11.77□□□□□ -0.52
PTBP1-204ENST00000394601 FBN2P35556 2912 aa11.77□□□□□ -0.52
PTBP1-204ENST00000394601 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.53
PTBP1-204ENST00000394601 TRBV12-3P01733 135 aa11.77□□□□□ -0.53
PTBP1-204ENST00000394601 C20orf173Q96LM9 149 aa11.77□□□□□ -0.53
PTBP1-204ENST00000394601 LINC00527Q9UJ94 153 aa11.77□□□□□ -0.53
PTBP1-204ENST00000394601 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
PTBP1-204ENST00000394601 C9orf47Q6ZRZ4 202 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 TEN1Q86WV5 123 aa11.76□□□□□ -0.53
PTBP1-204ENST00000394601 MRPL53Q96EL3 112 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms