RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 M0R1W7 72 aa12.47□□□□□ -0.41
EFEMP1-202ENST00000394555 FAM110DQ8TAY7 271 aaPredicted RBP12.47□□□□□ -0.41
EFEMP1-202ENST00000394555 C20orf173Q96LM9 149 aa12.47□□□□□ -0.41
EFEMP1-202ENST00000394555 KIR2DL4Q99706 377 aa12.47□□□□□ -0.41
EFEMP1-202ENST00000394555 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
EFEMP1-202ENST00000394555 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
EFEMP1-202ENST00000394555 CD7P09564 240 aa12.46□□□□□ -0.41
EFEMP1-202ENST00000394555 COX6B1P14854 86 aa12.46□□□□□ -0.41
EFEMP1-202ENST00000394555 Q6ZS46 218 aa12.46□□□□□ -0.41
EFEMP1-202ENST00000394555 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.41
EFEMP1-202ENST00000394555 LINC00527Q9UJ94 153 aa12.46□□□□□ -0.41
EFEMP1-202ENST00000394555 GNRH2O43555 120 aa12.46□□□□□ -0.41
EFEMP1-202ENST00000394555 ZFHX3Q15911 3703 aa12.46□□□□□ -0.42
EFEMP1-202ENST00000394555 RNASE4P34096 147 aaKnown RBP12.46□□□□□ -0.42
EFEMP1-202ENST00000394555 ASIPP42127 132 aa12.46□□□□□ -0.42
EFEMP1-202ENST00000394555 ANXA2RQ3ZCQ2 193 aa12.46□□□□□ -0.42
EFEMP1-202ENST00000394555 TMEM170BQ5T4T1 132 aa12.46□□□□□ -0.42
EFEMP1-202ENST00000394555 TEN1Q86WV5 123 aa12.46□□□□□ -0.42
EFEMP1-202ENST00000394555 UBE2D3P61077 147 aa12.45□□□□□ -0.42
EFEMP1-202ENST00000394555 UBE2D2P62837 147 aa12.45□□□□□ -0.42
EFEMP1-202ENST00000394555 RPL11P62913 178 aaKnown RBP12.45□□□□□ -0.42
EFEMP1-202ENST00000394555 H7C2G1 150 aa12.45□□□□□ -0.42
EFEMP1-202ENST00000394555 CRYGDP07320 174 aa12.45□□□□□ -0.42
EFEMP1-202ENST00000394555 RNF183Q96D59 192 aa12.45□□□□□ -0.42
EFEMP1-202ENST00000394555 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
EFEMP1-202ENST00000394555 A0A0J9YY99 117 aa12.44□□□□□ -0.42
EFEMP1-202ENST00000394555 A8MWV9 139 aa12.44□□□□□ -0.42
EFEMP1-202ENST00000394555 GATA3P23771 443 aa12.44□□□□□ -0.42
EFEMP1-202ENST00000394555 RPL39P62891 51 aaKnown RBP12.44□□□□□ -0.42
EFEMP1-202ENST00000394555 EEF1AKMT3Q96AZ1 226 aa12.44□□□□□ -0.42
EFEMP1-202ENST00000394555 RAX2Q96IS3 184 aa12.44□□□□□ -0.42
EFEMP1-202ENST00000394555 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
EFEMP1-202ENST00000394555 F6UB75 175 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 ZFP36P26651 326 aaKnown RBP12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 LYRM7Q5U5X0 104 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 PTPRZ1P23471 2315 aaPredicted RBP12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 CFC1BP0CG36 223 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 CFC1P0CG37 223 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 HERVK_113P61574 105 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 HRNRQ86YZ3 2850 aaPredicted RBP12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 ZNF292O60281 2723 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 TRAV21A0A0B4J279 112 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 IGF2-ASQ6U949 168 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 ANKRD29Q8N6D5 301 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
EFEMP1-202ENST00000394555 TSHBP01222 138 aa12.42□□□□□ -0.42
EFEMP1-202ENST00000394555 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
EFEMP1-202ENST00000394555 EBI3Q14213 229 aa12.42□□□□□ -0.42
EFEMP1-202ENST00000394555 OR10J6PQ8NGY7 276 aa12.42□□□□□ -0.42
EFEMP1-202ENST00000394555 MRPL53Q96EL3 112 aaKnown RBP12.42□□□□□ -0.42
EFEMP1-202ENST00000394555 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
EFEMP1-202ENST00000394555 JPT2Q9H910 190 aa12.41□□□□□ -0.42
EFEMP1-202ENST00000394555 F5H697 171 aa12.41□□□□□ -0.42
EFEMP1-202ENST00000394555 ZNF688P0C7X2 276 aa12.41□□□□□ -0.42
EFEMP1-202ENST00000394555 GPHB5Q86YW7 130 aa12.4□□□□□ -0.42
EFEMP1-202ENST00000394555 ANAPC13Q9BS18 74 aa12.4□□□□□ -0.42
EFEMP1-202ENST00000394555 CEP295Q9C0D2 2601 aa12.4□□□□□ -0.42
EFEMP1-202ENST00000394555 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.42
EFEMP1-202ENST00000394555 SVIPQ8NHG7 77 aa12.4□□□□□ -0.42
EFEMP1-202ENST00000394555 IGHV3-30P01768 117 aa12.4□□□□□ -0.43
EFEMP1-202ENST00000394555 IGHV3-30-5P0DP03 117 aa12.4□□□□□ -0.43
EFEMP1-202ENST00000394555 MINOS1Q5TGZ0 78 aa12.4□□□□□ -0.43
EFEMP1-202ENST00000394555 C10orf126Q8N4M7 172 aa12.4□□□□□ -0.43
EFEMP1-202ENST00000394555 MINOS1-NBL1R4GNA1 71 aa12.4□□□□□ -0.43
EFEMP1-202ENST00000394555 A0A087WWL8 130 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 PMVKQ15126 192 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 PRO1854Q9UHT4 67 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 MUC4Q99102 2169 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 TRBV20-1A0A075B6N2 111 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 IGHV3-64A0A075B6Q5 118 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 OOSP1A8MZH6 123 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 C9JAW5 83 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 UNQ9165/PRO28630Q6UXU0 137 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 C9orf139Q6ZV77 190 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 LINC00477Q96M19 166 aa12.39□□□□□ -0.43
EFEMP1-202ENST00000394555 TRBV7-1A0A0A6YYK4 115 aa12.38□□□□□ -0.43
EFEMP1-202ENST00000394555 CRIP2P52943 208 aaPredicted RBP12.38□□□□□ -0.43
EFEMP1-202ENST00000394555 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
EFEMP1-202ENST00000394555 ERG28Q9UKR5 140 aa12.38□□□□□ -0.43
EFEMP1-202ENST00000394555 ITLN2Q8WWU7 325 aaPredicted RBP12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 U3KQE9 123 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 CENPVL3A0A0U1RRI6 287 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 SAA4P35542 130 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 SLC25A29Q8N8R3 303 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 ZNRF2Q8NHG8 242 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 SS18L2Q9UHA2 77 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 IGIPA6NJ69 53 aa12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 LGALS3P17931 250 aaKnown RBP12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 OPRPNQ99935 248 aaPredicted RBP12.37□□□□□ -0.43
EFEMP1-202ENST00000394555 SLC25A20O43772 301 aa12.36□□□□□ -0.43
EFEMP1-202ENST00000394555 SRD5A1P18405 259 aa12.36□□□□□ -0.43
EFEMP1-202ENST00000394555 ZFAND6Q6FIF0 208 aa12.36□□□□□ -0.43
EFEMP1-202ENST00000394555 TEX29Q8N6K0 151 aa12.36□□□□□ -0.43
EFEMP1-202ENST00000394555 ZNF256Q9Y2P7 627 aaPredicted RBP12.36□□□□□ -0.43
EFEMP1-202ENST00000394555 COL6A6A6NMZ7 2263 aa12.36□□□□□ -0.43
EFEMP1-202ENST00000394555 A4D1N5 150 aa12.36□□□□□ -0.43
EFEMP1-202ENST00000394555 J3QQQ9 107 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms