RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 C11orf52Q96A22 123 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 TRAV23DV6A0A075B6W5 121 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 IGLC1P0CG04 106 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 FOXF2Q12947 444 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 A0A087WW49 117 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 KLK9Q9UKQ9 250 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 IGKV1D-43A0A0B4J1Z2 117 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 LYZL4Q96KX0 146 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 HIGD1BQ9P298 99 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 EFNA4P52798 201 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 CYYR1Q96J86 154 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 FANCD2OSQ96PS1 177 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 COX7A2LO14548 114 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 IGHV1-46P01743 117 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 PRR30Q53SZ7 412 aaPredicted RBP10.73□□□□□ -0.69
USP49-203ENST00000394253 C3orf56Q8N813 242 aa10.73□□□□□ -0.69
USP49-203ENST00000394253 KLF2Q9Y5W3 355 aaPredicted RBP10.73□□□□□ -0.69
USP49-203ENST00000394253 GNLYP22749 145 aa10.72□□□□□ -0.69
USP49-203ENST00000394253 RAI1Q7Z5J4 1906 aaPredicted RBP10.72□□□□□ -0.69
USP49-203ENST00000394253 BPY2O14599 106 aa10.72□□□□□ -0.69
USP49-203ENST00000394253 FGFBP3Q8TAT2 258 aa10.72□□□□□ -0.69
USP49-203ENST00000394253 NOTCH2Q04721 2471 aa10.72□□□□□ -0.69
USP49-203ENST00000394253 SERP1Q9Y6X1 66 aa10.72□□□□□ -0.69
USP49-203ENST00000394253 PCP2Q8IVA1 136 aa10.72□□□□□ -0.69
USP49-203ENST00000394253 ADAMTS20P59510 1910 aa10.71□□□□□ -0.69
USP49-203ENST00000394253 LINC01619G3V211 115 aa10.71□□□□□ -0.69
USP49-203ENST00000394253 IGKV1D-8A0A087WSZ0 117 aa10.71□□□□□ -0.69
USP49-203ENST00000394253 TFF2Q03403 129 aa10.71□□□□□ -0.69
USP49-203ENST00000394253 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.7
USP49-203ENST00000394253 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.7
USP49-203ENST00000394253 RBAKDNA6NC62 111 aa10.71□□□□□ -0.7
USP49-203ENST00000394253 IGHV1-18A0A0C4DH31 117 aa10.71□□□□□ -0.7
USP49-203ENST00000394253 LINC00473A8K010 186 aa10.71□□□□□ -0.7
USP49-203ENST00000394253 ELANEP08246 267 aa10.71□□□□□ -0.7
USP49-203ENST00000394253 IGLV3-32A0A0A0MS00 114 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 OVOL3O00110 214 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 LINC01356Q8N9X3 169 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 KIR2DL5BQ8NHK3 375 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.7□□□□□ -0.7
USP49-203ENST00000394253 E9PLN8 166 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 ZC2HC1AQ96GY0 325 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 C1orf53Q5VUE5 145 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 C5orf63A6NC05 138 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 SAA4P35542 130 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 A4D1N5 150 aa10.7□□□□□ -0.7
USP49-203ENST00000394253 WI2-2373I1.2A0A1W2PRP0 233 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 NDUFA4O00483 81 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
USP49-203ENST00000394253 DIRC1Q969H9 104 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 MST1P26927 711 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 C9orf106Q8NAJ2 232 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 ZNF672Q499Z4 452 aaPredicted RBP10.69□□□□□ -0.7
USP49-203ENST00000394253 C4orf51C9J302 202 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 RSPO4Q2I0M5 234 aaPredicted RBP10.69□□□□□ -0.7
USP49-203ENST00000394253 ZNF837Q96EG3 531 aaPredicted RBP10.69□□□□□ -0.7
USP49-203ENST00000394253 ZNF747Q9BV97 191 aa10.69□□□□□ -0.7
USP49-203ENST00000394253 IGKV1-16P04430 117 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 PTH2Q96A98 100 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 WFDC2Q14508 124 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 MST1LQ2TV78 715 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 NDUFA7O95182 113 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 WISP1O95388 367 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 ZNF883P0CG24 379 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 IGFL4Q6B9Z1 124 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 SPACA3Q8IXA5 215 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 NDUFA4L2Q9NRX3 87 aa10.68□□□□□ -0.7
USP49-203ENST00000394253 MUC6Q6W4X9 2439 aa10.67□□□□□ -0.7
USP49-203ENST00000394253 GFI1Q99684 422 aa10.66□□□□□ -0.7
USP49-203ENST00000394253 C20orf197Q8N268 126 aa10.66□□□□□ -0.7
USP49-203ENST00000394253 IGKV1OR2-108A0A075B7D4 117 aa10.66□□□□□ -0.7
USP49-203ENST00000394253 PMAIP1Q13794 54 aa10.66□□□□□ -0.7
USP49-203ENST00000394253 NDUFA1O15239 70 aa10.66□□□□□ -0.7
USP49-203ENST00000394253 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
USP49-203ENST00000394253 HIST2H2BDQ6DRA6 164 aa10.65□□□□□ -0.7
USP49-203ENST00000394253 MLST8Q9BVC4 326 aa10.65□□□□□ -0.7
USP49-203ENST00000394253 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
USP49-203ENST00000394253 LECT2O14960 151 aa10.65□□□□□ -0.7
USP49-203ENST00000394253 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
USP49-203ENST00000394253 B9D2Q9BPU9 175 aa10.65□□□□□ -0.7
USP49-203ENST00000394253 COL11A2P13942 1736 aaPredicted RBP10.65□□□□□ -0.7
USP49-203ENST00000394253 Q8N1Y9 231 aa10.65□□□□□ -0.7
USP49-203ENST00000394253 VOPP1Q96AW1 172 aa10.65□□□□□ -0.7
USP49-203ENST00000394253 H3BRN7 92 aa10.65□□□□□ -0.71
USP49-203ENST00000394253 TIMM17BO60830 172 aa10.65□□□□□ -0.71
USP49-203ENST00000394253 FGF23Q9GZV9 251 aaPredicted RBP10.65□□□□□ -0.71
USP49-203ENST00000394253 ATP1A1-AS1Q5TC04 95 aa10.64□□□□□ -0.71
USP49-203ENST00000394253 RNASE8Q8TDE3 154 aaKnown RBP10.64□□□□□ -0.71
USP49-203ENST00000394253 IGKV1-27A0A075B6S5 117 aa10.64□□□□□ -0.71
USP49-203ENST00000394253 IMUPQ9GZP8 106 aa10.64□□□□□ -0.71
USP49-203ENST00000394253 FN1P02751 2386 aaKnown RBP10.64□□□□□ -0.71
USP49-203ENST00000394253 LYPD3O95274 346 aa10.64□□□□□ -0.71
USP49-203ENST00000394253 GATA4P43694 442 aa10.64□□□□□ -0.71
USP49-203ENST00000394253 CD177Q8N6Q3 437 aa10.64□□□□□ -0.71
USP49-203ENST00000394253 MRPS36P82909 103 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms