RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
SIPA1-201ENST00000394224 GAGE12HA6NDE8 117 aa12.81□□□□□ -0.36
SIPA1-201ENST00000394224 SRSF1Q07955 248 aaKnown RBP eCLIP12.81□□□□□ -0.36
SIPA1-201ENST00000394224 ANXA2RQ3ZCQ2 193 aa12.81□□□□□ -0.36
SIPA1-201ENST00000394224 Q8N8P6 123 aa12.81□□□□□ -0.36
SIPA1-201ENST00000394224 SIGMAR1Q99720 223 aa12.81□□□□□ -0.36
SIPA1-201ENST00000394224 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
SIPA1-201ENST00000394224 DUSP14O95147 198 aaKnown RBP12.8□□□□□ -0.36
SIPA1-201ENST00000394224 LY6DQ14210 128 aa12.8□□□□□ -0.36
SIPA1-201ENST00000394224 TMEM95Q3KNT9 176 aa12.8□□□□□ -0.36
SIPA1-201ENST00000394224 RNASE13Q5GAN3 156 aaKnown RBP12.8□□□□□ -0.36
SIPA1-201ENST00000394224 PAX8Q06710 450 aa12.8□□□□□ -0.36
SIPA1-201ENST00000394224 C2orf66Q6UXQ4 117 aa12.8□□□□□ -0.36
SIPA1-201ENST00000394224 NOTCH2Q04721 2471 aa12.79□□□□□ -0.36
SIPA1-201ENST00000394224 CCDC144NLQ6NUI1 221 aa12.79□□□□□ -0.36
SIPA1-201ENST00000394224 C1orf122Q6ZSJ8 110 aa12.79□□□□□ -0.36
SIPA1-201ENST00000394224 TRAV8-2A0A0B4J237 113 aa12.79□□□□□ -0.36
SIPA1-201ENST00000394224 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
SIPA1-201ENST00000394224 ATP5LO75964 103 aa12.79□□□□□ -0.36
SIPA1-201ENST00000394224 PRM2P04554 102 aa12.79□□□□□ -0.36
SIPA1-201ENST00000394224 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
SIPA1-201ENST00000394224 HOXA3O43365 443 aaPredicted RBP12.77□□□□□ -0.36
SIPA1-201ENST00000394224 OR11H6Q8NGC7 330 aa12.77□□□□□ -0.36
SIPA1-201ENST00000394224 IGHV7-4-1A0A0J9YVY3 117 aa12.77□□□□□ -0.37
SIPA1-201ENST00000394224 CLPSL1A2RUU4 121 aa12.77□□□□□ -0.37
SIPA1-201ENST00000394224 SUMO2P61956 95 aaKnown RBP12.77□□□□□ -0.37
SIPA1-201ENST00000394224 FOXI2Q6ZQN5 318 aa12.77□□□□□ -0.37
SIPA1-201ENST00000394224 Q6ZS46 218 aa12.77□□□□□ -0.37
SIPA1-201ENST00000394224 NPBQ8NG41 125 aa12.77□□□□□ -0.37
SIPA1-201ENST00000394224 CFAP46Q8IYW2 2715 aa12.77□□□□□ -0.37
SIPA1-201ENST00000394224 NRACQ8N912 160 aa12.76□□□□□ -0.37
SIPA1-201ENST00000394224 PKD1L2Q7Z442 2459 aa12.76□□□□□ -0.37
SIPA1-201ENST00000394224 SYT8Q8NBV8 401 aa12.76□□□□□ -0.37
SIPA1-201ENST00000394224 A0A087WX48 190 aa12.76□□□□□ -0.37
SIPA1-201ENST00000394224 OR10J6PQ8NGY7 276 aa12.76□□□□□ -0.37
SIPA1-201ENST00000394224 SMIM2Q9BVW6 85 aa12.76□□□□□ -0.37
SIPA1-201ENST00000394224 Q1RN00 199 aa12.75□□□□□ -0.37
SIPA1-201ENST00000394224 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
SIPA1-201ENST00000394224 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
SIPA1-201ENST00000394224 BLCAPP62952 87 aa12.75□□□□□ -0.37
SIPA1-201ENST00000394224 MAPK1IP1LQ8NDC0 245 aa12.75□□□□□ -0.37
SIPA1-201ENST00000394224 CD7P09564 240 aa12.75□□□□□ -0.37
SIPA1-201ENST00000394224 EEF1AKMT3Q96AZ1 226 aa12.75□□□□□ -0.37
SIPA1-201ENST00000394224 TP53TG1Q9Y2A0 90 aa12.75□□□□□ -0.37
SIPA1-201ENST00000394224 GATD1Q8NB37 220 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 CLUHP3Q96NS8 147 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 H7C1H1 209 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 RNF5Q99942 180 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 KLK9Q9UKQ9 250 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 A0A0U1RRA0 63 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 MYMXA0A1B0GTQ4 84 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 PRSS2P07478 247 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 RASL10AQ92737 203 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 KIR2DL4Q99706 377 aa12.74□□□□□ -0.37
SIPA1-201ENST00000394224 SPANXB1Q9NS25 103 aaPredicted RBP12.74□□□□□ -0.37
SIPA1-201ENST00000394224 CHD6Q8TD26 2715 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 F8VRH5 84 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 TCF15Q12870 199 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 LINC01559Q495D7 138 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 ASIPP42127 132 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 J3QR89 54 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 NDUFS8O00217 210 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 SIVA1O15304 175 aa12.73□□□□□ -0.37
SIPA1-201ENST00000394224 LGALS1P09382 135 aaKnown RBP12.72□□□□□ -0.37
SIPA1-201ENST00000394224 PHLDA1Q8WV24 401 aaPredicted RBP12.72□□□□□ -0.37
SIPA1-201ENST00000394224 TRBV6-1A0A0K0K1D8 114 aa12.72□□□□□ -0.37
SIPA1-201ENST00000394224 ZNF56Q15929 161 aa12.72□□□□□ -0.37
SIPA1-201ENST00000394224 ACANP16112 2415 aa12.72□□□□□ -0.37
SIPA1-201ENST00000394224 LY6G5BQ8NDX9 201 aa12.71□□□□□ -0.37
SIPA1-201ENST00000394224 SPOCK3Q9BQ16 436 aa12.71□□□□□ -0.37
SIPA1-201ENST00000394224 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
SIPA1-201ENST00000394224 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.37
SIPA1-201ENST00000394224 IGLV2-18A0A075B6J9 118 aa12.71□□□□□ -0.38
SIPA1-201ENST00000394224 KNCNA6PVL3 124 aa12.71□□□□□ -0.38
SIPA1-201ENST00000394224 RRN3P1Q2M238 152 aa12.71□□□□□ -0.38
SIPA1-201ENST00000394224 BAALCQ8WXS3 180 aa12.71□□□□□ -0.38
SIPA1-201ENST00000394224 ZNF580Q9UK33 172 aa12.71□□□□□ -0.38
SIPA1-201ENST00000394224 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 E9PLD3 99 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 MXRA5Q9NR99 2828 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 TRAV41A0A0B4J266 112 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 ODF3BA8MYP8 253 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 RAB9AP51151 201 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 SLC50A1Q9BRV3 221 aa12.7□□□□□ -0.38
SIPA1-201ENST00000394224 IGHV4-39P01824 125 aa12.69□□□□□ -0.38
SIPA1-201ENST00000394224 MUC4Q99102 2169 aa12.69□□□□□ -0.38
SIPA1-201ENST00000394224 CEMP1Q6PRD7 247 aaPredicted RBP12.69□□□□□ -0.38
SIPA1-201ENST00000394224 PLNP26678 52 aa12.69□□□□□ -0.38
SIPA1-201ENST00000394224 CKS1BP61024 79 aa12.69□□□□□ -0.38
SIPA1-201ENST00000394224 FAM110DQ8TAY7 271 aaPredicted RBP12.68□□□□□ -0.38
SIPA1-201ENST00000394224 NBEAL2Q6ZNJ1 2754 aa12.68□□□□□ -0.38
SIPA1-201ENST00000394224 H3BUX3 64 aa12.68□□□□□ -0.38
SIPA1-201ENST00000394224 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
SIPA1-201ENST00000394224 NRGNQ92686 78 aa12.68□□□□□ -0.38
SIPA1-201ENST00000394224 RHPN1-AS1Q9BWJ2 59 aa12.68□□□□□ -0.38
SIPA1-201ENST00000394224 M0R1W7 72 aa12.67□□□□□ -0.38
SIPA1-201ENST00000394224 MT-ATP8P03928 68 aa12.67□□□□□ -0.38
SIPA1-201ENST00000394224 IGF2-ASQ6U949 168 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms