RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZFAND2AQ8N6M9 145 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 OR10J6PQ8NGY7 276 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 MRPL53Q96EL3 112 aaKnown RBP11.19□□□□□ -0.62
MKS1-202ENST00000393119 SLC25A34Q6PIV7 304 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 LINC00173Q6ZV60 143 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 CHCHD1Q96BP2 118 aaKnown RBP11.19□□□□□ -0.62
MKS1-202ENST00000393119 GFRA4Q9GZZ7 299 aa11.19□□□□□ -0.62
MKS1-202ENST00000393119 IGHV1-24A0A0C4DH33 117 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 RNASE4P34096 147 aaKnown RBP11.18□□□□□ -0.62
MKS1-202ENST00000393119 ERASQ7Z444 233 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 TMEM61Q8N0U2 210 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 VWFP04275 2813 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 K7EQG2 157 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 CSN3P07498 182 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 NSUN5P1Q3KNT7 163 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
MKS1-202ENST00000393119 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
MKS1-202ENST00000393119 TMEM160Q9NX00 188 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 TRRAPQ9Y4A5 3859 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 TRAV8-6A0A0B4J262 113 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 CCL24O00175 119 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 OVOL1O14753 267 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 BMI1P35226 326 aa11.17□□□□□ -0.62
MKS1-202ENST00000393119 F8P00451 2351 aa11.16□□□□□ -0.62
MKS1-202ENST00000393119 KNCNA6PVL3 124 aa11.16□□□□□ -0.62
MKS1-202ENST00000393119 FXYD7P58549 80 aa11.16□□□□□ -0.62
MKS1-202ENST00000393119 C16orf95Q9H693 158 aa11.16□□□□□ -0.62
MKS1-202ENST00000393119 TEP1Q99973 2627 aaKnown RBP11.16□□□□□ -0.62
MKS1-202ENST00000393119 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
MKS1-202ENST00000393119 UFSP1Q6NVU6 142 aa11.16□□□□□ -0.62
MKS1-202ENST00000393119 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
MKS1-202ENST00000393119 CD300EQ496F6 205 aaPredicted RBP11.15□□□□□ -0.62
MKS1-202ENST00000393119 FER1L6-AS1Q8NA97 138 aa11.15□□□□□ -0.62
MKS1-202ENST00000393119 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
MKS1-202ENST00000393119 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 K7ERU9 68 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 GNRH2O43555 120 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 IGLC6P0CF74 106 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 ID1P41134 155 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 PROK1P58294 105 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 FAM19A4Q96LR4 140 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 FBLL1A6NHQ2 334 aaKnown RBP11.14□□□□□ -0.63
MKS1-202ENST00000393119 TMEM238C9JI98 176 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 GAS8-AS1O95177 125 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 TWIST1Q15672 202 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
MKS1-202ENST00000393119 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
MKS1-202ENST00000393119 DEFB131AP59861 70 aa11.13□□□□□ -0.63
MKS1-202ENST00000393119 LINC01545Q5VT33 79 aa11.13□□□□□ -0.63
MKS1-202ENST00000393119 APRG1Q8IVJ8 170 aa11.13□□□□□ -0.63
MKS1-202ENST00000393119 AMN1Q8IY45 258 aa11.13□□□□□ -0.63
MKS1-202ENST00000393119 PRM2P04554 102 aa11.13□□□□□ -0.63
MKS1-202ENST00000393119 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
MKS1-202ENST00000393119 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 A0A0J9YX75 114 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 FHL3Q13643 280 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 SPINK13Q1W4C9 94 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 SPATA3Q8NHX4 192 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 CHTOPQ9Y3Y2 248 aaKnown RBP11.12□□□□□ -0.63
MKS1-202ENST00000393119 TSSC4Q9Y5U2 329 aaPredicted RBP11.12□□□□□ -0.63
MKS1-202ENST00000393119 H3BVH4 76 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
MKS1-202ENST00000393119 DYNLRB2Q8TF09 96 aa11.12□□□□□ -0.63
MKS1-202ENST00000393119 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
MKS1-202ENST00000393119 COX8AP10176 69 aa11.11□□□□□ -0.63
MKS1-202ENST00000393119 RIGQ13278 110 aa11.11□□□□□ -0.63
MKS1-202ENST00000393119 PEMTQ9UBM1 199 aa11.11□□□□□ -0.63
MKS1-202ENST00000393119 LOC102724200A0A096LPH7 203 aaPredicted RBP11.11□□□□□ -0.63
MKS1-202ENST00000393119 SCGB2A2Q13296 93 aa11.11□□□□□ -0.63
MKS1-202ENST00000393119 FGF6P10767 208 aa11.1□□□□□ -0.63
MKS1-202ENST00000393119 SEC11AP67812 179 aa11.1□□□□□ -0.63
MKS1-202ENST00000393119 SAP30O75446 220 aa11.1□□□□□ -0.63
MKS1-202ENST00000393119 NCR2O95944 276 aa11.1□□□□□ -0.63
MKS1-202ENST00000393119 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
MKS1-202ENST00000393119 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
MKS1-202ENST00000393119 ATRQ13535 2644 aa11.09□□□□□ -0.63
MKS1-202ENST00000393119 C7orf71A4D174 169 aa11.09□□□□□ -0.63
MKS1-202ENST00000393119 RBMY1BA6NDE4 496 aaKnown RBP11.09□□□□□ -0.63
MKS1-202ENST00000393119 RBMY1EA6NEQ0 496 aaKnown RBP11.09□□□□□ -0.63
MKS1-202ENST00000393119 RBMY1DP0C7P1 496 aaKnown RBP11.09□□□□□ -0.63
MKS1-202ENST00000393119 EVI2AP22794 236 aa11.09□□□□□ -0.63
MKS1-202ENST00000393119 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
MKS1-202ENST00000393119 KLLNB2CW77 178 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 G3V4G9 280 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 GATA1P15976 413 aaPredicted RBP11.08□□□□□ -0.64
MKS1-202ENST00000393119 NOTCH3Q9UM47 2321 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 D6R8Y8 96 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 NDUFA7O95182 113 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms