RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 PRO0628Q9UI54 55 aa12.58□□□□□ -0.39
TRA2A-202ENST00000392502 RELNP78509 3460 aa12.58□□□□□ -0.4
TRA2A-202ENST00000392502 IGHV3-33P01772 117 aa12.58□□□□□ -0.4
TRA2A-202ENST00000392502 IGKV1-16P04430 117 aa12.58□□□□□ -0.4
TRA2A-202ENST00000392502 CNTFRP26992 372 aa12.58□□□□□ -0.4
TRA2A-202ENST00000392502 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
TRA2A-202ENST00000392502 GFRALQ6UXV0 394 aa12.58□□□□□ -0.4
TRA2A-202ENST00000392502 LINC00643Q86TS7 51 aa12.58□□□□□ -0.4
TRA2A-202ENST00000392502 PRR25Q96S07 402 aa12.58□□□□□ -0.4
TRA2A-202ENST00000392502 TLN1Q9Y490 2541 aaKnown RBP12.58□□□□□ -0.4
TRA2A-202ENST00000392502 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.57□□□□□ -0.4
TRA2A-202ENST00000392502 C2orf82Q6UX34 121 aa12.57□□□□□ -0.4
TRA2A-202ENST00000392502 ARFGEF3Q5TH69 2177 aa12.57□□□□□ -0.4
TRA2A-202ENST00000392502 TRBV30A0A0K0K1B3 111 aa12.57□□□□□ -0.4
TRA2A-202ENST00000392502 C17orf100A8MU93 164 aa12.57□□□□□ -0.4
TRA2A-202ENST00000392502 CCL3L1P16619 93 aa12.57□□□□□ -0.4
TRA2A-202ENST00000392502 MALP21145 153 aa12.57□□□□□ -0.4
TRA2A-202ENST00000392502 RPUSD1Q9UJJ7 312 aaKnown RBP12.57□□□□□ -0.4
TRA2A-202ENST00000392502 ATOX1O00244 68 aa12.56□□□□□ -0.4
TRA2A-202ENST00000392502 NEXN-AS1Q8NBZ9 246 aa12.56□□□□□ -0.4
TRA2A-202ENST00000392502 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
TRA2A-202ENST00000392502 SH2D1AO60880 128 aa12.56□□□□□ -0.4
TRA2A-202ENST00000392502 ORMDL2Q53FV1 153 aa12.56□□□□□ -0.4
TRA2A-202ENST00000392502 TRBV19A0A075B6N1 114 aa12.55□□□□□ -0.4
TRA2A-202ENST00000392502 LYPD2Q6UXB3 125 aa12.55□□□□□ -0.4
TRA2A-202ENST00000392502 PLEKHB2Q96CS7 222 aa12.55□□□□□ -0.4
TRA2A-202ENST00000392502 LINC00527Q9UJ94 153 aa12.55□□□□□ -0.4
TRA2A-202ENST00000392502 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
TRA2A-202ENST00000392502 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
TRA2A-202ENST00000392502 ASCL2Q99929 193 aa12.54□□□□□ -0.4
TRA2A-202ENST00000392502 VKORC1Q9BQB6 163 aa12.54□□□□□ -0.4
TRA2A-202ENST00000392502 PVRIGQ6DKI7 326 aa12.54□□□□□ -0.4
TRA2A-202ENST00000392502 CCL17Q92583 94 aa12.54□□□□□ -0.4
TRA2A-202ENST00000392502 SAA1P0DJI8 122 aaPredicted RBP12.53□□□□□ -0.4
TRA2A-202ENST00000392502 TMEM263Q8WUH6 116 aaKnown RBP12.53□□□□□ -0.4
TRA2A-202ENST00000392502 METTL26Q96S19 204 aa12.53□□□□□ -0.4
TRA2A-202ENST00000392502 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
TRA2A-202ENST00000392502 LRBAP50851 2863 aa12.53□□□□□ -0.4
TRA2A-202ENST00000392502 POLEQ07864 2286 aa12.53□□□□□ -0.4
TRA2A-202ENST00000392502 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
TRA2A-202ENST00000392502 TMEM178BH3BS89 294 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 TOMM6Q96B49 74 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 PTPRQQ9UMZ3 2332 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 DCHS2Q6V1P9 2916 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 K7ENP7 123 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 PDE6HQ13956 83 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 C2orf48Q96LS8 159 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 SCGB3A1Q96QR1 104 aa12.52□□□□□ -0.41
TRA2A-202ENST00000392502 KLK5Q9Y337 293 aaPredicted RBP12.52□□□□□ -0.41
TRA2A-202ENST00000392502 TACC2O95359 2948 aa12.51□□□□□ -0.41
TRA2A-202ENST00000392502 Q5XG85 94 aa12.51□□□□□ -0.41
TRA2A-202ENST00000392502 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
TRA2A-202ENST00000392502 TMEM167AQ8TBQ9 72 aa12.51□□□□□ -0.41
TRA2A-202ENST00000392502 CTSZQ9UBR2 303 aa12.51□□□□□ -0.41
TRA2A-202ENST00000392502 IGF2RP11717 2491 aa12.5□□□□□ -0.41
TRA2A-202ENST00000392502 H3BTX0 84 aa12.5□□□□□ -0.41
TRA2A-202ENST00000392502 ZNF833PQ6ZTB9 187 aa12.5□□□□□ -0.41
TRA2A-202ENST00000392502 IL17RELQ6ZVW7 336 aa12.5□□□□□ -0.41
TRA2A-202ENST00000392502 E7EQL1 145 aa12.5□□□□□ -0.41
TRA2A-202ENST00000392502 COX6CP09669 75 aa12.5□□□□□ -0.41
TRA2A-202ENST00000392502 ZZEF1O43149 2961 aa12.5□□□□□ -0.41
TRA2A-202ENST00000392502 E7EUB6 86 aa12.49□□□□□ -0.41
TRA2A-202ENST00000392502 WT1-ASQ06250 92 aa12.49□□□□□ -0.41
TRA2A-202ENST00000392502 C4orf26Q17RF5 130 aa12.49□□□□□ -0.41
TRA2A-202ENST00000392502 RNASE6Q93091 150 aaKnown RBP12.49□□□□□ -0.41
TRA2A-202ENST00000392502 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
TRA2A-202ENST00000392502 DLX1P56177 255 aa12.48□□□□□ -0.41
TRA2A-202ENST00000392502 HIST1H4AP62805 103 aaKnown RBP12.48□□□□□ -0.41
TRA2A-202ENST00000392502 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
TRA2A-202ENST00000392502 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
TRA2A-202ENST00000392502 H7C423 109 aa12.47□□□□□ -0.41
TRA2A-202ENST00000392502 J3QLI3 93 aa12.47□□□□□ -0.41
TRA2A-202ENST00000392502 PRB3Q04118 309 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-202ENST00000392502 CEMP1Q6PRD7 247 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-202ENST00000392502 JPT2Q9H910 190 aa12.47□□□□□ -0.41
TRA2A-202ENST00000392502 MRPL36Q9P0J6 103 aaKnown RBP12.47□□□□□ -0.41
TRA2A-202ENST00000392502 EGR2P11161 476 aaPredicted RBP12.47□□□□□ -0.41
TRA2A-202ENST00000392502 NRACQ8N912 160 aa12.47□□□□□ -0.41
TRA2A-202ENST00000392502 NAV3Q8IVL0 2385 aa12.47□□□□□ -0.41
TRA2A-202ENST00000392502 LOXP28300 417 aaPredicted RBP12.46□□□□□ -0.41
TRA2A-202ENST00000392502 ERCC8Q13216 396 aa12.46□□□□□ -0.41
TRA2A-202ENST00000392502 Q1RN00 199 aa12.46□□□□□ -0.41
TRA2A-202ENST00000392502 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
TRA2A-202ENST00000392502 C10orf55Q5SWW7 151 aa12.46□□□□□ -0.41
TRA2A-202ENST00000392502 DYNLRB1Q9NP97 96 aa12.46□□□□□ -0.41
TRA2A-202ENST00000392502 PLXNB1O43157 2135 aa12.46□□□□□ -0.41
TRA2A-202ENST00000392502 NDUFB3O43676 98 aa12.46□□□□□ -0.42
TRA2A-202ENST00000392502 IGHV4-39P01824 125 aa12.46□□□□□ -0.42
TRA2A-202ENST00000392502 SPTA1P02549 2419 aa12.46□□□□□ -0.42
TRA2A-202ENST00000392502 LYNX1G3V0Z9 82 aa12.45□□□□□ -0.42
TRA2A-202ENST00000392502 LYNX1P0DP58 116 aa12.45□□□□□ -0.42
TRA2A-202ENST00000392502 SHANK2-AS3Q9BTD1 123 aa12.45□□□□□ -0.42
TRA2A-202ENST00000392502 NDUFC2-KCTD14E9PQ53 114 aa12.45□□□□□ -0.42
TRA2A-202ENST00000392502 C8orf31Q8N9H6 132 aa12.45□□□□□ -0.42
TRA2A-202ENST00000392502 CHD8Q9HCK8 2581 aa12.44□□□□□ -0.42
TRA2A-202ENST00000392502 TRAV13-1A0A0B4J241 112 aa12.44□□□□□ -0.42
TRA2A-202ENST00000392502 TINCRA0A1B0GVN0 87 aa12.44□□□□□ -0.42
TRA2A-202ENST00000392502 CGB1A6NKQ9 187 aa12.44□□□□□ -0.42
TRA2A-202ENST00000392502 ELANEP08246 267 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms