RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 MPLKIPQ8TAP9 179 aa12.11□□□□□ -0.47
ALK-201ENST00000389048 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
ALK-201ENST00000389048 DEFB125Q8N687 156 aa12.11□□□□□ -0.47
ALK-201ENST00000389048 TNRC6BQ9UPQ9 1833 aaKnown RBP12.11□□□□□ -0.47
ALK-201ENST00000389048 H0Y9J4 135 aa12.1□□□□□ -0.47
ALK-201ENST00000389048 J3KT08 172 aa12.1□□□□□ -0.47
ALK-201ENST00000389048 COX7A2LO14548 114 aa12.1□□□□□ -0.47
ALK-201ENST00000389048 CTSZQ9UBR2 303 aa12.1□□□□□ -0.47
ALK-201ENST00000389048 TRAV26-1A0A087WT03 109 aa12.1□□□□□ -0.47
ALK-201ENST00000389048 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
ALK-201ENST00000389048 DYSFO75923 2080 aa12.1□□□□□ -0.47
ALK-201ENST00000389048 A0A0B4J2C4 111 aa12.09□□□□□ -0.47
ALK-201ENST00000389048 FXYD2P54710 66 aa12.09□□□□□ -0.47
ALK-201ENST00000389048 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
ALK-201ENST00000389048 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
ALK-201ENST00000389048 ETV2O00321 342 aaPredicted RBP12.09□□□□□ -0.47
ALK-201ENST00000389048 BLCAPP62952 87 aa12.09□□□□□ -0.47
ALK-201ENST00000389048 ELANEP08246 267 aa12.08□□□□□ -0.47
ALK-201ENST00000389048 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.47
ALK-201ENST00000389048 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
ALK-201ENST00000389048 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.48
ALK-201ENST00000389048 LECT2O14960 151 aa12.08□□□□□ -0.48
ALK-201ENST00000389048 GP9P14770 177 aa12.08□□□□□ -0.48
ALK-201ENST00000389048 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
ALK-201ENST00000389048 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 AJUBAQ96IF1 538 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 PTH2Q96A98 100 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 MP68P56378 58 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 TICRRQ7Z2Z1 1910 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 DOCK8Q8NF50 2099 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 PRR20EP86478 221 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 PRR20CP86479 221 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 PRR20DP86480 221 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 PRR20BP86481 221 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 PRR20AP86496 221 aa12.07□□□□□ -0.48
ALK-201ENST00000389048 HERV-K104P63124 156 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 TM2D2Q9BX73 214 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 CACNA1GO43497 2377 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 NDUFB1O75438 58 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
ALK-201ENST00000389048 A0A096LNI7 61 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 MLST8Q9BVC4 326 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 FAM215AQ9Y5M1 114 aa12.06□□□□□ -0.48
ALK-201ENST00000389048 KIR2DL5BA0A0G2JN68 375 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 KIR2DL5BA0A0G2JPC4 375 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 LGALS9O00182 355 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 KIR2DL5AQ8N109 375 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 Q8N1Y9 231 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 LINC00311Q8N616 119 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 SPANXDQ9BXN6 97 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 PLXND1Q9Y4D7 1925 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 WDR90Q96KV7 1748 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 LY6G6EA0A0G2JKS1 128 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 CRYGBP07316 175 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 U3KQA8 63 aa12.05□□□□□ -0.48
ALK-201ENST00000389048 DOPEY2Q9Y3R5 2298 aa12.04□□□□□ -0.48
ALK-201ENST00000389048 LRCOL1A6NCL2 159 aa12.04□□□□□ -0.48
ALK-201ENST00000389048 PLA2G5P39877 138 aa12.04□□□□□ -0.48
ALK-201ENST00000389048 LYPD6Q86Y78 171 aa12.04□□□□□ -0.48
ALK-201ENST00000389048 TCF20Q9UGU0 1960 aaKnown RBP12.04□□□□□ -0.48
ALK-201ENST00000389048 C16orf74Q96GX8 76 aa12.04□□□□□ -0.48
ALK-201ENST00000389048 IGHV4-30-2A0A087WSY4 118 aa12.04□□□□□ -0.48
ALK-201ENST00000389048 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
ALK-201ENST00000389048 ATOX1O00244 68 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 IGKV4-1P06312 121 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 FRMD6-AS1P0C7T7 363 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 J3QKU1 62 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 DEFB135Q30KP9 77 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 HHLA3Q9XRX5 114 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 CHD3Q12873 2000 aaKnown RBP12.03□□□□□ -0.48
ALK-201ENST00000389048 TRAV23DV6A0A075B6W5 121 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 CCL18P55774 89 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 SCXQ7RTU7 201 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 ZDBF2Q9HCK1 2354 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 J3QLI3 93 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 FOXI1Q12951 378 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 FANCD2OSQ96PS1 177 aa12.03□□□□□ -0.48
ALK-201ENST00000389048 TAX1BP3O14907 124 aa12.02□□□□□ -0.48
ALK-201ENST00000389048 TSC2P49815 1807 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 WI2-2373I1.2A0A1W2PRP0 233 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 LINC01620Q4KN68 170 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 FAM110AQ9BQ89 295 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 CACNA1EQ15878 2313 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 A0A0J9YWU9 116 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 PKIGQ9Y2B9 76 aa12.02□□□□□ -0.49
ALK-201ENST00000389048 IGLV1-44P01699 117 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 KLK12Q9UKR0 248 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 ATP5G1P05496 136 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 IGKV2-24A0A0C4DH68 120 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 P0DMU3 169 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 FAM231AP0DMU4 169 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 FAM231CP0DMU5 169 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 SRSF2Q01130 221 aaKnown RBP12.01□□□□□ -0.49
ALK-201ENST00000389048 NCOR1O75376 2440 aa12.01□□□□□ -0.49
ALK-201ENST00000389048 IGHV7-81A0A0B4J1V7 117 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms