RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 TRGV11A0A075B6L2 103 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 M0R381 172 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 TRGC1P0CF51 173 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 MED14OSP0DP75 135 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 KIAA1644Q3SXP7 199 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 C1QTNF4Q9BXJ3 329 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 SCRT2Q9NQ03 307 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 PKD1L1Q8TDX9 2849 aa19.54■□□□□ 0.72
MSX1-201ENST00000382723 CSTL1Q9H114 145 aa19.53■□□□□ 0.72
MSX1-201ENST00000382723 EGFEM1PQ0D2K5 195 aa19.53■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BKO60814 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BJP06899 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BOP23527 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BBP33778 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BDP58876 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BCP62807 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 CACNG7P62955 275 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST2H2BEQ16778 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BHQ93079 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BNQ99877 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 HIST1H2BMQ99879 126 aa19.52■□□□□ 0.72
MSX1-201ENST00000382723 TMEM256Q8N2U0 113 aa19.51■□□□□ 0.71
MSX1-201ENST00000382723 LOC102724200A0A096LPH7 203 aaPredicted RBP19.51■□□□□ 0.71
MSX1-201ENST00000382723 GOLT1BQ9Y3E0 138 aa19.51■□□□□ 0.71
MSX1-201ENST00000382723 C9orf85Q96MD7 179 aa19.5■□□□□ 0.71
MSX1-201ENST00000382723 LINC00467Q9BRT7 94 aa19.5■□□□□ 0.71
MSX1-201ENST00000382723 IGHV4-4A0A075B6R2 117 aa19.49■□□□□ 0.71
MSX1-201ENST00000382723 GATD1Q8NB37 220 aa19.49■□□□□ 0.71
MSX1-201ENST00000382723 CSNK1G2-AS1Q8NCQ2 148 aa19.49■□□□□ 0.71
MSX1-201ENST00000382723 DMRTA1Q5VZB9 504 aa19.49■□□□□ 0.71
MSX1-201ENST00000382723 ZNF493Q6ZR52 646 aa19.49■□□□□ 0.71
MSX1-201ENST00000382723 SNRPEP62304 92 aaKnown RBP19.48■□□□□ 0.71
MSX1-201ENST00000382723 IGHV4-30-4P0DP06 118 aa19.47■□□□□ 0.71
MSX1-201ENST00000382723 AZU1P20160 251 aa19.47■□□□□ 0.71
MSX1-201ENST00000382723 ZMAT5Q9UDW3 170 aaKnown RBP19.47■□□□□ 0.71
MSX1-201ENST00000382723 C5orf52A6NGY3 159 aa19.47■□□□□ 0.71
MSX1-201ENST00000382723 AMN1Q8IY45 258 aa19.47■□□□□ 0.71
MSX1-201ENST00000382723 GSN-AS1Q9NRJ2 163 aa19.47■□□□□ 0.71
MSX1-201ENST00000382723 EVI2AP22794 236 aa19.46■□□□□ 0.71
MSX1-201ENST00000382723 SAMD5Q5TGI4 173 aa19.46■□□□□ 0.71
MSX1-201ENST00000382723 TMEM191AQ9H0A3 160 aa19.46■□□□□ 0.71
MSX1-201ENST00000382723 ZNF415Q09FC8 603 aa19.45■□□□□ 0.7
MSX1-201ENST00000382723 SMIM15Q7Z3B0 74 aa19.45■□□□□ 0.7
MSX1-201ENST00000382723 S100A6P06703 90 aa19.44■□□□□ 0.7
MSX1-201ENST00000382723 FAM104BQ5XKR9 115 aa19.44■□□□□ 0.7
MSX1-201ENST00000382723 SRIP30626 198 aa19.43■□□□□ 0.7
MSX1-201ENST00000382723 NDUFA6P56556 154 aa19.43■□□□□ 0.7
MSX1-201ENST00000382723 NXPH4O95158 308 aa19.43■□□□□ 0.7
MSX1-201ENST00000382723 APOC4P55056 127 aa19.43■□□□□ 0.7
MSX1-201ENST00000382723 C11orf72Q8NBR9 251 aa19.43■□□□□ 0.7
MSX1-201ENST00000382723 RCHY1Q96PM5 261 aa19.43■□□□□ 0.7
MSX1-201ENST00000382723 UBE2CO00762 179 aa19.42■□□□□ 0.7
MSX1-201ENST00000382723 ZNF705AQ6ZN79 300 aaPredicted RBP19.42■□□□□ 0.7
MSX1-201ENST00000382723 SYT8Q8NBV8 401 aa19.42■□□□□ 0.7
MSX1-201ENST00000382723 KIR2DL5BA0A0G2JN68 375 aa19.41■□□□□ 0.7
MSX1-201ENST00000382723 KIR2DL5BA0A0G2JPC4 375 aa19.41■□□□□ 0.7
MSX1-201ENST00000382723 AKR1D1P51857 326 aa19.41■□□□□ 0.7
MSX1-201ENST00000382723 KIR2DL5AQ8N109 375 aa19.41■□□□□ 0.7
MSX1-201ENST00000382723 KIR2DL5BQ8NHK3 375 aa19.41■□□□□ 0.7
MSX1-201ENST00000382723 ZNF876PQ49A33 203 aa19.41■□□□□ 0.7
MSX1-201ENST00000382723 C14orf178Q8N769 122 aaPredicted RBP19.41■□□□□ 0.7
MSX1-201ENST00000382723 JPT2Q9H910 190 aa19.41■□□□□ 0.7
MSX1-201ENST00000382723 RIPPLY3P57055 190 aa19.39■□□□□ 0.7
MSX1-201ENST00000382723 MRPL51Q4U2R6 128 aaKnown RBP19.39■□□□□ 0.7
MSX1-201ENST00000382723 LINC00518Q8N0U6 118 aa19.39■□□□□ 0.7
MSX1-201ENST00000382723 RNASE8Q8TDE3 154 aaKnown RBP19.39■□□□□ 0.7
MSX1-201ENST00000382723 RNF185Q96GF1 192 aa19.39■□□□□ 0.7
MSX1-201ENST00000382723 AP1S3Q96PC3 154 aa19.39■□□□□ 0.7
MSX1-201ENST00000382723 MUC4Q99102 2169 aa19.39■□□□□ 0.69
MSX1-201ENST00000382723 RAB4AP20338 218 aa19.39■□□□□ 0.69
MSX1-201ENST00000382723 ALKBH7Q9BT30 221 aaPredicted RBP19.39■□□□□ 0.69
MSX1-201ENST00000382723 TMEM263Q8WUH6 116 aaKnown RBP19.38■□□□□ 0.69
MSX1-201ENST00000382723 RRN3P1Q2M238 152 aa19.37■□□□□ 0.69
MSX1-201ENST00000382723 M0R2P5 195 aa19.37■□□□□ 0.69
MSX1-201ENST00000382723 DEFB135Q30KP9 77 aa19.37■□□□□ 0.69
MSX1-201ENST00000382723 D6R8Y8 96 aa19.36■□□□□ 0.69
MSX1-201ENST00000382723 SMKR1H3BMG3 65 aa19.36■□□□□ 0.69
MSX1-201ENST00000382723 A0A087WWL8 130 aa19.35■□□□□ 0.69
MSX1-201ENST00000382723 SPXQ9BT56 116 aa19.35■□□□□ 0.69
MSX1-201ENST00000382723 DPH3P1Q9H4G8 78 aa19.35■□□□□ 0.69
MSX1-201ENST00000382723 NCR2O95944 276 aa19.35■□□□□ 0.69
MSX1-201ENST00000382723 MGPP08493 103 aa19.35■□□□□ 0.69
MSX1-201ENST00000382723 MRPL16Q9NX20 251 aaKnown RBP19.35■□□□□ 0.69
MSX1-201ENST00000382723 SMIM17P0DL12 118 aa19.34■□□□□ 0.69
MSX1-201ENST00000382723 CKS2P33552 79 aa19.34■□□□□ 0.69
MSX1-201ENST00000382723 C16orf74Q96GX8 76 aa19.34■□□□□ 0.69
MSX1-201ENST00000382723 IQCJQ1A5X6 159 aa19.33■□□□□ 0.69
MSX1-201ENST00000382723 TRAV26-2A0A0B4J265 109 aa19.33■□□□□ 0.68
MSX1-201ENST00000382723 PRB2P02812 416 aaPredicted RBP19.33■□□□□ 0.68
MSX1-201ENST00000382723 FAM74A4Q5TZK3 123 aa19.33■□□□□ 0.68
MSX1-201ENST00000382723 ORMDL3Q8N138 153 aa19.33■□□□□ 0.68
MSX1-201ENST00000382723 IL17DQ8TAD2 202 aa19.33■□□□□ 0.68
MSX1-201ENST00000382723 SAMD10Q9BYL1 202 aa19.33■□□□□ 0.68
MSX1-201ENST00000382723 C18orf32Q8TCD1 76 aa19.32■□□□□ 0.68
MSX1-201ENST00000382723 GAS8-AS1O95177 125 aa19.31■□□□□ 0.68
MSX1-201ENST00000382723 BAGE3Q86Y29 109 aa19.31■□□□□ 0.68
MSX1-201ENST00000382723 KIF25-AS1Q9Y6Z4 181 aa19.31■□□□□ 0.68
MSX1-201ENST00000382723 U3KQK5 164 aa19.31■□□□□ 0.68
MSX1-201ENST00000382723 PRELID3AQ96N28 172 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms