RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 FBN2P35556 2912 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 CELSR2Q9HCU4 2923 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 IGHV7-4-1A0A0J9YVY3 117 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 A6NDX4 124 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 G3V318 75 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 J3QLI3 93 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 BUB3O43684 328 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 AVPP01185 164 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 IGHV3-23P01764 117 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 TRGV3P03979 118 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 HLA-DMBP28068 263 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 KRTAP10-9P60411 292 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 FOXI1Q12951 378 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 C15orf32Q32M92 178 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 TMEM78Q5T7P6 136 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 AMTNQ6UX39 209 aa6.81□□□□□ -1.32
GPNMB-202ENST00000381990 H3BUX3 64 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 ERCC8Q13216 396 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 C19orf54Q5BKX5 351 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 IGFL4Q6B9Z1 124 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 TOMM6Q96B49 74 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 C20orf78Q9BR46 151 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 CSPG4Q6UVK1 2322 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 NAV2Q8IVL1 2488 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 TRAV41A0A0B4J266 112 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 SPANXN1Q5VSR9 72 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 MORN3Q6PF18 240 aaPredicted RBP6.8□□□□□ -1.32
GPNMB-202ENST00000381990 LRRC75A-AS1Q8N1F1 130 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 CYSLTR1Q9Y271 337 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 UFC1Q9Y3C8 167 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 PRAC2D3DTV9 90 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 PPIFP30405 207 aaKnown RBP6.8□□□□□ -1.32
GPNMB-202ENST00000381990 SCGB2A2Q13296 93 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 LY6EQ16553 131 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 SCGB3A1Q96QR1 104 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 ABCA12Q86UK0 2595 aa6.8□□□□□ -1.32
GPNMB-202ENST00000381990 LINC01549A6NIU2 74 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 C9orf47Q6ZRZ4 202 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 AGPAT4-IT1Q9H0P7 198 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 ZFAND3Q9H8U3 227 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 TRBV7-1A0A0A6YYK4 115 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 PPP1R17O96001 155 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 TGFAP01135 160 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 IGHG2P01859 326 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 IGF1P05019 195 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 LGALS1P09382 135 aaKnown RBP6.79□□□□□ -1.32
GPNMB-202ENST00000381990 UBE2D1P51668 147 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 SUMO2P61956 95 aaKnown RBP6.79□□□□□ -1.32
GPNMB-202ENST00000381990 ZNF418Q8TF45 676 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-202ENST00000381990 EEF1AKMT3Q96AZ1 226 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 C11orf21Q9P2W6 132 aa6.79□□□□□ -1.32
GPNMB-202ENST00000381990 CHD6Q8TD26 2715 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 TRAV26-2A0A0B4J265 109 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 FAM223BA6NKX1 122 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 RNF223E7ERA6 249 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 CLEC3BP05452 202 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 FAM223AQ8IWN6 122 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 CCDC140Q96MF4 163 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 AGRNO00468 2067 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 TRBV20-1A0A075B6N2 111 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 INSL3P51460 131 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 ATP5G2Q06055 141 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 Q5PR19 223 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 PAPPA-AS1Q5QFB9 102 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 RNF182Q8N6D2 247 aa6.78□□□□□ -1.32
GPNMB-202ENST00000381990 M0R381 172 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 BRI3O95415 125 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 UBE2D3P61077 147 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 UBE2D2P62837 147 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 CLEC19AQ6UXS0 136 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 SYT8Q8NBV8 401 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 MAPK1IP1LQ8NDC0 245 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 PRADC1Q9BSG0 188 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 ZNF815PA8K554 130 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 IGHV4-31P0DP07 118 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 CRYBA4P53673 196 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 SCGB1D4Q6XE38 83 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 LINC00527Q9UJ94 153 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 CR1P17927 2039 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 CREBBPQ92793 2442 aa6.77□□□□□ -1.33
GPNMB-202ENST00000381990 CELSR1Q9NYQ6 3014 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 H3BUA1 57 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 DEFB112Q30KQ8 113 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 PPDPFLQ8WWR9 84 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 BAALCQ8WXS3 180 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 CDIP1Q9H305 208 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 GEMIN7Q9H840 131 aaKnown RBP6.76□□□□□ -1.33
GPNMB-202ENST00000381990 KMT2BQ9UMN6 2715 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-202ENST00000381990 DOPEY2Q9Y3R5 2298 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 IGHV3-35A0A0C4DH35 117 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 SPINK8P0C7L1 97 aa6.76□□□□□ -1.33
GPNMB-202ENST00000381990 SRSF9Q13242 221 aaKnown RBP eCLIP6.76□□□□□ -1.33
GPNMB-202ENST00000381990 TEN1Q86WV5 123 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms