RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 LCE6AA0A183 80 aa13.73□□□□□ -0.21
GTF3A-201ENST00000381140 TCL1AP56279 114 aa13.73□□□□□ -0.21
GTF3A-201ENST00000381140 FAM162BQ5T6X4 162 aa13.73□□□□□ -0.21
GTF3A-201ENST00000381140 TMEM88Q6PEY1 159 aa13.73□□□□□ -0.21
GTF3A-201ENST00000381140 Q6ZTI0 123 aa13.73□□□□□ -0.21
GTF3A-201ENST00000381140 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
GTF3A-201ENST00000381140 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
GTF3A-201ENST00000381140 TRGV1A0A0A0MS02 117 aa13.72□□□□□ -0.21
GTF3A-201ENST00000381140 GNRH2O43555 120 aa13.72□□□□□ -0.21
GTF3A-201ENST00000381140 GATCO43716 136 aaKnown RBP13.72□□□□□ -0.21
GTF3A-201ENST00000381140 P01737 135 aa13.72□□□□□ -0.21
GTF3A-201ENST00000381140 DAZ2Q13117 558 aaKnown RBP13.72□□□□□ -0.21
GTF3A-201ENST00000381140 CT83Q5H943 113 aa13.72□□□□□ -0.21
GTF3A-201ENST00000381140 IMMP2LQ96T52 175 aa13.72□□□□□ -0.21
GTF3A-201ENST00000381140 MDFICQ9P1T7 246 aa13.72□□□□□ -0.21
GTF3A-201ENST00000381140 F5H768 121 aa13.71□□□□□ -0.21
GTF3A-201ENST00000381140 SH2D1AO60880 128 aa13.71□□□□□ -0.21
GTF3A-201ENST00000381140 ATP5G1P05496 136 aa13.71□□□□□ -0.21
GTF3A-201ENST00000381140 RPP21Q9H633 154 aaKnown RBP13.71□□□□□ -0.21
GTF3A-201ENST00000381140 MRPL16Q9NX20 251 aaKnown RBP13.71□□□□□ -0.21
GTF3A-201ENST00000381140 FABP5P3A8MUU1 101 aa13.71□□□□□ -0.22
GTF3A-201ENST00000381140 PFN1P07737 140 aaKnown RBP13.71□□□□□ -0.22
GTF3A-201ENST00000381140 IL36BQ9NZH7 164 aa13.71□□□□□ -0.22
GTF3A-201ENST00000381140 C11orf21Q9P2W6 132 aa13.71□□□□□ -0.22
GTF3A-201ENST00000381140 APLNQ9ULZ1 77 aa13.71□□□□□ -0.22
GTF3A-201ENST00000381140 KMT2CQ8NEZ4 4911 aaKnown RBP13.7□□□□□ -0.22
GTF3A-201ENST00000381140 TRGV2A0A075B6R0 118 aa13.7□□□□□ -0.22
GTF3A-201ENST00000381140 LY6G6CO95867 125 aa13.7□□□□□ -0.22
GTF3A-201ENST00000381140 TYMSP04818 313 aa13.7□□□□□ -0.22
GTF3A-201ENST00000381140 KCNS1Q96KK3 526 aa13.7□□□□□ -0.22
GTF3A-201ENST00000381140 YPEL4Q96NS1 127 aa13.7□□□□□ -0.22
GTF3A-201ENST00000381140 NDUFAF3Q9BU61 184 aa13.7□□□□□ -0.22
GTF3A-201ENST00000381140 DYNC2H1Q8NCM8 4307 aaKnown RBP13.7□□□□□ -0.22
GTF3A-201ENST00000381140 TDRG1Q3Y452 100 aa13.69□□□□□ -0.22
GTF3A-201ENST00000381140 LINC00612Q8N6U2 182 aa13.69□□□□□ -0.22
GTF3A-201ENST00000381140 LINC00476Q8WZB0 136 aa13.69□□□□□ -0.22
GTF3A-201ENST00000381140 IGHV3-16A0A0C4DH30 117 aa13.68□□□□□ -0.22
GTF3A-201ENST00000381140 SPINK4O60575 86 aa13.68□□□□□ -0.22
GTF3A-201ENST00000381140 S100PP25815 95 aa13.68□□□□□ -0.22
GTF3A-201ENST00000381140 TCTAP57738 103 aa13.68□□□□□ -0.22
GTF3A-201ENST00000381140 KCNIP4Q6PIL6 250 aa13.68□□□□□ -0.22
GTF3A-201ENST00000381140 MUC4Q99102 2169 aa13.68□□□□□ -0.22
GTF3A-201ENST00000381140 NACAE9PAV3 2078 aa13.67□□□□□ -0.22
GTF3A-201ENST00000381140 SMIM27A0A1W2PRY6 76 aa13.67□□□□□ -0.22
GTF3A-201ENST00000381140 A8MWL6 223 aa13.67□□□□□ -0.22
GTF3A-201ENST00000381140 ELOBQ15370 118 aa13.67□□□□□ -0.22
GTF3A-201ENST00000381140 LINC01559Q495D7 138 aa13.67□□□□□ -0.22
GTF3A-201ENST00000381140 OR2D3Q8NGH3 330 aa13.67□□□□□ -0.22
GTF3A-201ENST00000381140 TSKUQ8WUA8 353 aa13.67□□□□□ -0.22
GTF3A-201ENST00000381140 PLECQ15149 4684 aaKnown RBP13.66□□□□□ -0.22
GTF3A-201ENST00000381140 TRAV9-1A0A075B6T8 112 aa13.66□□□□□ -0.22
GTF3A-201ENST00000381140 FAM231BA6NCW3 169 aa13.66□□□□□ -0.22
GTF3A-201ENST00000381140 ORM1P02763 201 aa13.66□□□□□ -0.22
GTF3A-201ENST00000381140 RPS20P60866 119 aaKnown RBP13.66□□□□□ -0.22
GTF3A-201ENST00000381140 GFRA4Q9GZZ7 299 aa13.66□□□□□ -0.22
GTF3A-201ENST00000381140 URGCP-MRPS24S4R325 110 aa13.66□□□□□ -0.22
GTF3A-201ENST00000381140 ALMS1Q8TCU4 4167 aa13.65□□□□□ -0.22
GTF3A-201ENST00000381140 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
GTF3A-201ENST00000381140 SPXQ9BT56 116 aa13.65□□□□□ -0.22
GTF3A-201ENST00000381140 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
GTF3A-201ENST00000381140 XKRY2A2RUG3 117 aa13.64□□□□□ -0.23
GTF3A-201ENST00000381140 COLCA2A8K830 154 aa13.64□□□□□ -0.23
GTF3A-201ENST00000381140 RPL19P84098 196 aaKnown RBP13.64□□□□□ -0.23
GTF3A-201ENST00000381140 LGALS9BQ3B8N2 356 aa13.64□□□□□ -0.23
GTF3A-201ENST00000381140 FAM210BQ96KR6 192 aa13.64□□□□□ -0.23
GTF3A-201ENST00000381140 IGKV3D-20A0A0C4DH25 116 aa13.63□□□□□ -0.23
GTF3A-201ENST00000381140 CXCL1P09341 107 aa13.63□□□□□ -0.23
GTF3A-201ENST00000381140 HOXA5P20719 270 aa13.63□□□□□ -0.23
GTF3A-201ENST00000381140 BTF3L4Q96K17 158 aa13.63□□□□□ -0.23
GTF3A-201ENST00000381140 TMSB15BA0A087X1C1 80 aa13.62□□□□□ -0.23
GTF3A-201ENST00000381140 M0R2P5 195 aa13.62□□□□□ -0.23
GTF3A-201ENST00000381140 FOXA3P55318 350 aaPredicted RBP13.62□□□□□ -0.23
GTF3A-201ENST00000381140 FAM3BP58499 235 aaPredicted RBP13.62□□□□□ -0.23
GTF3A-201ENST00000381140 NAT8BQ9UHF3 227 aa13.62□□□□□ -0.23
GTF3A-201ENST00000381140 A0A0J9YY99 117 aa13.61□□□□□ -0.23
GTF3A-201ENST00000381140 A0A1W2PPQ1 181 aa13.61□□□□□ -0.23
GTF3A-201ENST00000381140 NUDT3O95989 172 aa13.61□□□□□ -0.23
GTF3A-201ENST00000381140 S100A4P26447 101 aaKnown RBP13.61□□□□□ -0.23
GTF3A-201ENST00000381140 LGALS9CQ6DKI2 356 aa13.61□□□□□ -0.23
GTF3A-201ENST00000381140 ZNF575Q86XF7 245 aa13.61□□□□□ -0.23
GTF3A-201ENST00000381140 GTSF1Q8WW33 167 aa13.61□□□□□ -0.23
GTF3A-201ENST00000381140 TRAV26-1A0A087WT03 109 aa13.6□□□□□ -0.23
GTF3A-201ENST00000381140 TGIF2-C20orf24A0A0A6YYL0 155 aa13.6□□□□□ -0.23
GTF3A-201ENST00000381140 GRIFINA4D1Z8 144 aa13.6□□□□□ -0.23
GTF3A-201ENST00000381140 HIGD1CA8MV81 97 aa13.6□□□□□ -0.23
GTF3A-201ENST00000381140 ASIPP42127 132 aa13.6□□□□□ -0.23
GTF3A-201ENST00000381140 DNAH1Q9P2D7 4330 aa13.59□□□□□ -0.23
GTF3A-201ENST00000381140 GZMBP10144 247 aa13.59□□□□□ -0.23
GTF3A-201ENST00000381140 C15orf53Q8NAA6 179 aa13.59□□□□□ -0.23
GTF3A-201ENST00000381140 NUP35Q8NFH5 326 aa13.59□□□□□ -0.23
GTF3A-201ENST00000381140 RASL10AQ92737 203 aa13.59□□□□□ -0.23
GTF3A-201ENST00000381140 C18orf15Q96N68 181 aa13.59□□□□□ -0.23
GTF3A-201ENST00000381140 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
GTF3A-201ENST00000381140 H3BVH4 76 aa13.58□□□□□ -0.23
GTF3A-201ENST00000381140 RNASE3P12724 160 aaKnown RBP13.58□□□□□ -0.23
GTF3A-201ENST00000381140 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.58□□□□□ -0.23
GTF3A-201ENST00000381140 C9orf85Q96MD7 179 aa13.58□□□□□ -0.23
GTF3A-201ENST00000381140 LYSTQ99698 3801 aa13.58□□□□□ -0.24
GTF3A-201ENST00000381140 IGLC6P0CF74 106 aa13.58□□□□□ -0.24
GTF3A-201ENST00000381140 ZNF876PQ49A33 203 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms