RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 GAGE13Q4V321 117 aa9.43□□□□□ -0.9
GABPB1-203ENST00000380877 STPG4Q8N801 248 aa9.43□□□□□ -0.9
GABPB1-203ENST00000380877 H3BUT2 72 aa9.43□□□□□ -0.9
GABPB1-203ENST00000380877 NEGR1Q7Z3B1 354 aa9.43□□□□□ -0.9
GABPB1-203ENST00000380877 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
GABPB1-203ENST00000380877 FN1P02751 2386 aaKnown RBP9.43□□□□□ -0.9
GABPB1-203ENST00000380877 SEC11AP67812 179 aa9.43□□□□□ -0.9
GABPB1-203ENST00000380877 SPXQ9BT56 116 aa9.43□□□□□ -0.9
GABPB1-203ENST00000380877 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 IGHG4P01861 327 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 CRPP02741 224 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 MRPS16Q9Y3D3 137 aaKnown RBP9.42□□□□□ -0.9
GABPB1-203ENST00000380877 SPCS1Q9Y6A9 102 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 I3L3M4 83 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 DEFB1P60022 68 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
GABPB1-203ENST00000380877 HIST2H2BCQ6DN03 193 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 MSRB1Q9NZV6 116 aa9.42□□□□□ -0.9
GABPB1-203ENST00000380877 A0A087X0K7 114 aa9.41□□□□□ -0.9
GABPB1-203ENST00000380877 GTSF1Q8WW33 167 aa9.41□□□□□ -0.9
GABPB1-203ENST00000380877 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
GABPB1-203ENST00000380877 C9orf47Q6ZRZ4 202 aa9.41□□□□□ -0.9
GABPB1-203ENST00000380877 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
GABPB1-203ENST00000380877 ZNRF2Q8NHG8 242 aa9.41□□□□□ -0.9
GABPB1-203ENST00000380877 C20orf144Q9BQM9 153 aa9.41□□□□□ -0.9
GABPB1-203ENST00000380877 DNAJC9-AS1A6NH13 148 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 MPV17L2Q567V2 206 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 C20orf78Q9BR46 151 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 TRANK1O15050 2925 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 A0A1W2PPR1 153 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 M0R2P5 195 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 DNAL4O96015 105 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 DAD1P61803 113 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 DOPEY1Q5JWR5 2465 aa9.4□□□□□ -0.9
GABPB1-203ENST00000380877 APOC4P55056 127 aa9.4□□□□□ -0.91
GABPB1-203ENST00000380877 Q6YL49 198 aa9.39□□□□□ -0.91
GABPB1-203ENST00000380877 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
GABPB1-203ENST00000380877 GATA1P15976 413 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-203ENST00000380877 SRSF2Q01130 221 aaKnown RBP9.39□□□□□ -0.91
GABPB1-203ENST00000380877 KLF5Q13887 457 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-203ENST00000380877 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-203ENST00000380877 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
GABPB1-203ENST00000380877 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
GABPB1-203ENST00000380877 Q8N6K4 173 aa9.39□□□□□ -0.91
GABPB1-203ENST00000380877 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-203ENST00000380877 F5H768 121 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 TRBV6-1A0A0K0K1D8 114 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 PMVKQ15126 192 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 RASL10AQ92737 203 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 TRBV7-9A0A0J9YWB2 115 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 PAX2Q02962 417 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 U3KQE9 123 aa9.38□□□□□ -0.91
GABPB1-203ENST00000380877 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 LGALS9CQ6DKI2 356 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 DPH3Q96FX2 82 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 TIMM21Q9BVV7 248 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 CLPSL1A2RUU4 121 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 C19orf71A6NCJ1 209 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 RNASE1P07998 156 aaKnown RBP9.37□□□□□ -0.91
GABPB1-203ENST00000380877 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
GABPB1-203ENST00000380877 LINC00158P58513 81 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 MRPL35Q9NZE8 188 aaKnown RBP9.36□□□□□ -0.91
GABPB1-203ENST00000380877 NOP10Q9NPE3 64 aaKnown RBP9.36□□□□□ -0.91
GABPB1-203ENST00000380877 ADAMTS20P59510 1910 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 A0A1B0GWB2 263 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 NUPR1O60356 82 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 IGLV2-8P01709 118 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 IGLL1P15814 213 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 ZNF479Q96JC4 524 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 ZNF747Q9BV97 191 aa9.36□□□□□ -0.91
GABPB1-203ENST00000380877 ESDP10768 282 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 CKS1BP61024 79 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 C9orf66Q5T8R8 295 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 DLX4Q92988 240 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-203ENST00000380877 F8VRH5 84 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 MYCNOSP40205 109 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 RNF152Q8N8N0 203 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
GABPB1-203ENST00000380877 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 NAA38Q9BRA0 125 aaKnown RBP9.35□□□□□ -0.91
GABPB1-203ENST00000380877 TMEM243Q9BU79 118 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
GABPB1-203ENST00000380877 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 CTRLP40313 264 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.91
GABPB1-203ENST00000380877 Q8N1Y9 231 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 A0A0J9YX75 114 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 PRIMA1Q86XR5 153 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 NPC2P61916 151 aa9.34□□□□□ -0.91
GABPB1-203ENST00000380877 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
GABPB1-203ENST00000380877 MLST8Q9BVC4 326 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms