RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TRAV12-2A0A075B6T6 113 aa9.9□□□□□ -0.82
DNMT3A-204ENST00000380756 TRBV6-1A0A0K0K1D8 114 aa9.9□□□□□ -0.82
DNMT3A-204ENST00000380756 ADARB2-AS1A8MUL3 147 aa9.9□□□□□ -0.82
DNMT3A-204ENST00000380756 PRB1P04280 392 aa9.9□□□□□ -0.82
DNMT3A-204ENST00000380756 IGHV1OR15-1A0A075B7D0 117 aa9.9□□□□□ -0.82
DNMT3A-204ENST00000380756 PRAC2D3DTV9 90 aa9.9□□□□□ -0.82
DNMT3A-204ENST00000380756 ZNF493Q6ZR52 646 aa9.9□□□□□ -0.82
DNMT3A-204ENST00000380756 Q8N9W7 124 aa9.9□□□□□ -0.83
DNMT3A-204ENST00000380756 GNRH2O43555 120 aa9.89□□□□□ -0.83
DNMT3A-204ENST00000380756 CTRLP40313 264 aa9.89□□□□□ -0.83
DNMT3A-204ENST00000380756 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
DNMT3A-204ENST00000380756 CHCHD5Q9BSY4 110 aa9.89□□□□□ -0.83
DNMT3A-204ENST00000380756 IGHV7-4-1A0A0J9YVY3 117 aa9.89□□□□□ -0.83
DNMT3A-204ENST00000380756 PRRC2CQ9Y520 2896 aaKnown RBP9.89□□□□□ -0.83
DNMT3A-204ENST00000380756 BOD1L2Q8IYS8 172 aa9.89□□□□□ -0.83
DNMT3A-204ENST00000380756 I3L3M4 83 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 K7EMI3 77 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 TRAV13-1A0A0B4J241 112 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 J3QQQ9 107 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 SAP30O75446 220 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 RASL10AQ92737 203 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 UBE2E2Q96LR5 201 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
DNMT3A-204ENST00000380756 RBMY1BA6NDE4 496 aaKnown RBP9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 RBMY1EA6NEQ0 496 aaKnown RBP9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 RBMY1DP0C7P1 496 aaKnown RBP9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 RBMY1A1P0DJD3 496 aaKnown RBP9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 RBMY1CP0DJD4 496 aa9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 FXYD2P54710 66 aa9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 PPDPFLQ8WWR9 84 aa9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 INSP01308 110 aa9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 LOXL1Q08397 574 aaPredicted RBP9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 LINC00158P58513 81 aa9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
DNMT3A-204ENST00000380756 RHODO00212 210 aa9.86□□□□□ -0.83
DNMT3A-204ENST00000380756 TEX48A0A1B0GUV7 120 aa9.86□□□□□ -0.83
DNMT3A-204ENST00000380756 GATA3P23771 443 aa9.86□□□□□ -0.83
DNMT3A-204ENST00000380756 RPL39LQ96EH5 51 aaKnown RBP9.86□□□□□ -0.83
DNMT3A-204ENST00000380756 LINC01356Q8N9X3 169 aa9.86□□□□□ -0.83
DNMT3A-204ENST00000380756 KLHL30-AS1Q8NEE0 82 aa9.86□□□□□ -0.83
DNMT3A-204ENST00000380756 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
DNMT3A-204ENST00000380756 RNF114Q9Y508 228 aa9.85□□□□□ -0.83
DNMT3A-204ENST00000380756 CPAMD8Q8IZJ3 1885 aa9.85□□□□□ -0.83
DNMT3A-204ENST00000380756 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
DNMT3A-204ENST00000380756 FGF6P10767 208 aa9.85□□□□□ -0.83
DNMT3A-204ENST00000380756 IGLL5B9A064 214 aa9.85□□□□□ -0.83
DNMT3A-204ENST00000380756 TCTEX1D4Q5JR98 221 aa9.85□□□□□ -0.83
DNMT3A-204ENST00000380756 ODF1Q14990 250 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 ZNF48Q96MX3 618 aaPredicted RBP9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 TP73-AS1Q9UF72 201 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 JMJD1CQ15652 2540 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 HIGD1BQ9P298 99 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 NDUFA12Q9UI09 145 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 USP9XQ93008 2570 aaPredicted RBP9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 H3BUA1 57 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 HTN3P15516 51 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 MAPK1IP1LQ8NDC0 245 aa9.84□□□□□ -0.83
DNMT3A-204ENST00000380756 USP9YO00507 2555 aaPredicted RBP9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 CRPP02741 224 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 MYCNOSP40205 109 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 XCL2Q9UBD3 114 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 AZU1P20160 251 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 ZNF80P51504 273 aaPredicted RBP9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 SH2D6Q7Z4S9 175 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 ARHGAP32A7KAX9 2087 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 Q8NA96 180 aa9.83□□□□□ -0.84
DNMT3A-204ENST00000380756 LINC00310P59036 64 aa9.82□□□□□ -0.84
DNMT3A-204ENST00000380756 TMEM86BQ8N661 226 aa9.82□□□□□ -0.84
DNMT3A-204ENST00000380756 ZFP36P26651 326 aaKnown RBP9.82□□□□□ -0.84
DNMT3A-204ENST00000380756 PAX4O43316 350 aa9.82□□□□□ -0.84
DNMT3A-204ENST00000380756 FOXI2Q6ZQN5 318 aa9.82□□□□□ -0.84
DNMT3A-204ENST00000380756 C9orf47Q6ZRZ4 202 aa9.82□□□□□ -0.84
DNMT3A-204ENST00000380756 HIVEP2P31629 2446 aa9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 BLCAPP62952 87 aa9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 ATP6V0BQ99437 205 aa9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 ZFYVE26Q68DK2 2539 aa9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 ANKRD11Q6UB99 2663 aaPredicted RBP9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 SRSF2Q01130 221 aaKnown RBP9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 RNF223E7ERA6 249 aa9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 CMC4P56277 68 aaPredicted RBP9.81□□□□□ -0.84
DNMT3A-204ENST00000380756 C5orf56Q8N8D9 126 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 SLC25A20O43772 301 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 CRYGBP07316 175 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 RHOHQ15669 191 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 AJUBAQ96IF1 538 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 MALP21145 153 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 WFDC2Q14508 124 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 DSCAMO60469 2012 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 IGHV4-61A0A0C4DH41 118 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 LEPROTO15243 131 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 FBXL19-AS1Q494R0 122 aa9.8□□□□□ -0.84
DNMT3A-204ENST00000380756 RPL35AP18077 110 aaKnown RBP9.79□□□□□ -0.84
DNMT3A-204ENST00000380756 DEFB1P60022 68 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms