RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 FAM231CP0DMU5 169 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 HOXA5P20719 270 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 C15orf53Q8NAA6 179 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 SPXQ9BT56 116 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 MANBALQ9NQG1 85 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 C11orf21Q9P2W6 132 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 ZFP30Q9Y2G7 519 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 TRAV26-1A0A087WT03 109 aa6.47□□□□□ -1.37
HMGN1-202ENST00000380747 TRBV6-1A0A0K0K1D8 114 aa6.47□□□□□ -1.37
HMGN1-202ENST00000380747 FABP5P3A8MUU1 101 aa6.47□□□□□ -1.37
HMGN1-202ENST00000380747 IFNA1P01562 189 aa6.47□□□□□ -1.37
HMGN1-202ENST00000380747 LGALS9BQ3B8N2 356 aa6.47□□□□□ -1.37
HMGN1-202ENST00000380747 ALKAL2Q6UX46 152 aa6.47□□□□□ -1.37
HMGN1-202ENST00000380747 ZC2HC1AQ96GY0 325 aa6.47□□□□□ -1.37
HMGN1-202ENST00000380747 M0R2P5 195 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 SH2D1AO60880 128 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 LTAP01374 205 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 ORM1P02763 201 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 S100A9P06702 114 aaKnown RBP6.46□□□□□ -1.38
HMGN1-202ENST00000380747 BAGE2Q86Y30 109 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 POM121L12Q8N7R1 296 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 NHLRC2Q8NBF2 726 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 C18orf15Q96N68 181 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 PKD1P98161 4303 aa6.46□□□□□ -1.38
HMGN1-202ENST00000380747 TRGV4A0A0C4DH28 118 aa6.45□□□□□ -1.38
HMGN1-202ENST00000380747 B4DEV8 164 aa6.45□□□□□ -1.38
HMGN1-202ENST00000380747 C9JCJ5 164 aa6.45□□□□□ -1.38
HMGN1-202ENST00000380747 M0R036 132 aa6.45□□□□□ -1.38
HMGN1-202ENST00000380747 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
HMGN1-202ENST00000380747 ASIPP42127 132 aa6.45□□□□□ -1.38
HMGN1-202ENST00000380747 FAM162BQ5T6X4 162 aa6.45□□□□□ -1.38
HMGN1-202ENST00000380747 TMSB15BA0A087X1C1 80 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 IGKV3D-20A0A0C4DH25 116 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 GRIFINA4D1Z8 144 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 SFTA3P0C7M3 94 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 BCL2P10415 239 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 RPL35P42766 123 aaKnown RBP6.44□□□□□ -1.38
HMGN1-202ENST00000380747 CRIP1P50238 77 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 BLOC1S1P78537 153 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 MEF2BQ02080 365 aaPredicted RBP6.44□□□□□ -1.38
HMGN1-202ENST00000380747 ZNF876PQ49A33 203 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 COX8CQ7Z4L0 72 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 OR4C5Q8NGB2 326 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 RASL10AQ92737 203 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 C11orf52Q96A22 123 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 VSIG2Q96IQ7 327 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 ZNF479Q96JC4 524 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 TXNDC17Q9BRA2 123 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 VAX2Q9UIW0 290 aa6.44□□□□□ -1.38
HMGN1-202ENST00000380747 TRAV4A0A0B4J268 109 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 KRBOX1C9JBD0 128 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 H3BNG1 76 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 PDE6DO43924 150 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 CCL18P55774 89 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 FHL2Q14192 279 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 RNF151Q2KHN1 245 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 ZNF674Q2M3X9 581 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 RNF212Q495C1 297 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 PRR27Q6MZM9 219 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 C9orf85Q96MD7 179 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 DERL1Q9BUN8 251 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 MED9Q9NWA0 146 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 HHLA3Q9XRX5 114 aa6.43□□□□□ -1.38
HMGN1-202ENST00000380747 HSPG2P98160 4391 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 IGLV2-18A0A075B6J9 118 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 RAB19A4D1S5 217 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 PGPEP1LA6NFU8 196 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 H3BVH4 76 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 M0R2N4 97 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 RNASE3P12724 160 aaKnown RBP6.42□□□□□ -1.38
HMGN1-202ENST00000380747 TAGLN2P37802 199 aaKnown RBP6.42□□□□□ -1.38
HMGN1-202ENST00000380747 CRYBA4P53673 196 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 SLAQ13239 276 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 CENPWQ5EE01 88 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 ZNF506Q5JVG8 444 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 ICOSQ9Y6W8 199 aa6.42□□□□□ -1.38
HMGN1-202ENST00000380747 HERC1Q15751 4861 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 IGHV3-73A0A0B4J1V6 119 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 RS1O15537 224 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 ARMS2P0C7Q2 107 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 MGST1P10620 155 aaKnown RBP6.41□□□□□ -1.38
HMGN1-202ENST00000380747 RPL19P84098 196 aaKnown RBP6.41□□□□□ -1.38
HMGN1-202ENST00000380747 SYT8Q8NBV8 401 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 PTH2Q96A98 100 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 MLST8Q9BVC4 326 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
HMGN1-202ENST00000380747 A0A096LPF7 62 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 RBFOX3A6NFN3 312 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 GNG4P50150 75 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 FAM3BP58499 235 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-202ENST00000380747 ESRGQ1W209 222 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 CFAP126Q5VTH2 177 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 LINC00336Q6ZUF6 198 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 PCNPQ8WW12 178 aaKnown RBP6.4□□□□□ -1.38
HMGN1-202ENST00000380747 IL36BQ9NZH7 164 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 PHLDA3Q9Y5J5 127 aa6.4□□□□□ -1.38
HMGN1-202ENST00000380747 MUC4Q99102 2169 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms