RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 PSMB8P28062 276 aa6.02□□□□□ -1.44
PDLIM5-204ENST00000380176 CUBNO60494 3623 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 A0A0G2JLM5 398 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 A8MZ25 164 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 ZFAND2AQ8N6M9 145 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 CST9LQ9H4G1 147 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 HSPB8Q9UJY1 196 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 APCP25054 2843 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 TSPOP30536 169 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 HNRNPA3P51991 378 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 C11orf44Q8N8P7 122 aa6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 DAZ1Q9NQZ3 744 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-204ENST00000380176 H3BS24 57 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 SIVA1O15304 175 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 SNAI2O43623 268 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 TFPI2P48307 235 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 SORL1Q92673 2214 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 TLN2Q9Y4G6 2542 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 H3BVH4 76 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 IGHV4-31P0DP07 118 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 TCTEX1D4Q5JR98 221 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 LINC01545Q5VT33 79 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 OR8A1Q8NGG7 326 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 AGRNO00468 2067 aa6.01□□□□□ -1.45
PDLIM5-204ENST00000380176 TRAV26-2A0A0B4J265 109 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 A0A1W2PRX2 142 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 STPG4Q8N801 248 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 OR10J6PQ8NGY7 276 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 LINC00477Q96M19 166 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 LAMTOR2Q9Y2Q5 125 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 CREBBPQ92793 2442 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 MUC4Q99102 2169 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 J3QLI3 93 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 OVOL1O14753 267 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 FAM19A4Q96LR4 140 aa6□□□□□ -1.45
PDLIM5-204ENST00000380176 AKAP9Q99996 3911 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 FSHBP01225 129 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 HBDP02042 147 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 RNASE4P34096 147 aaKnown RBP5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 PRRC2AP48634 2157 aaKnown RBP5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 HINT1P49773 126 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 DCANP1Q8TF63 244 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 ZNF580Q9UK33 172 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 UFC1Q9Y3C8 167 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 LENEPQ9Y5L5 61 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 ANXA2RQ3ZCQ2 193 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 SPANXN1Q5VSR9 72 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 OR4C5Q8NGB2 326 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 DUX5Q96PT3 197 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 MAP1LC3AQ9H492 121 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 ST20Q9HBF5 79 aa5.99□□□□□ -1.45
PDLIM5-204ENST00000380176 K7EMT4 169 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 HOXA3O43365 443 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 GNRH2O43555 120 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 CKS1BP61024 79 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 DEFB113Q30KQ7 82 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 Q6YL49 198 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 C18orf15Q96N68 181 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 VPREB3Q9UKI3 123 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 MRPS16Q9Y3D3 137 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 TENM4Q6N022 2769 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 IGHV4-4A0A075B6R2 117 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 NRACQ8N912 160 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 ZNF702PQ9H963 129 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 SCRT2Q9NQ03 307 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 ITPR3Q14573 2671 aa5.98□□□□□ -1.45
PDLIM5-204ENST00000380176 IGLV2-18A0A075B6J9 118 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 TRAV21A0A0B4J279 112 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 M0R381 172 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 LEPP41159 167 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 TCTAP57738 103 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 CACNG7P62955 275 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 MYO9AB2RTY4 2548 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 SONP18583 2426 aaKnown RBP5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 LINC01546A6NGU7 62 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 FAM229AH3BQW9 127 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 M0QXV9 152 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 Q6ZVH6 145 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 OR2K2Q8NGT1 345 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 IFI27L1Q96BM0 104 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 Q96MF0 132 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 IGHV4OR15-8A0A075B7B6 117 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 A0A087WW49 117 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 SYNJ2BPP57105 145 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 KRTAP1-3Q8IUG1 177 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 APRG1Q8IVJ8 170 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 MS4A6AQ9H2W1 248 aa5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 TSSC4Q9Y5U2 329 aaPredicted RBP5.97□□□□□ -1.45
PDLIM5-204ENST00000380176 ZNF688P0C7X2 276 aa5.96□□□□□ -1.45
PDLIM5-204ENST00000380176 RNASE3P12724 160 aaKnown RBP5.96□□□□□ -1.45
PDLIM5-204ENST00000380176 C18orf65Q6ZTR6 163 aa5.96□□□□□ -1.45
PDLIM5-204ENST00000380176 DKK2Q9UBU2 259 aa5.96□□□□□ -1.45
PDLIM5-204ENST00000380176 S100A4P26447 101 aaKnown RBP5.96□□□□□ -1.46
PDLIM5-204ENST00000380176 SMCPP49901 116 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-204ENST00000380176 LGALS9BQ3B8N2 356 aa5.96□□□□□ -1.46
PDLIM5-204ENST00000380176 MPV17L2Q567V2 206 aa5.96□□□□□ -1.46
PDLIM5-204ENST00000380176 LGALS9CQ6DKI2 356 aa5.96□□□□□ -1.46
PDLIM5-204ENST00000380176 SLC25A34Q6PIV7 304 aa5.96□□□□□ -1.46
PDLIM5-204ENST00000380176 TMEM158Q8WZ71 300 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms