RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NDUFB3O43676 98 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 PFN2P35080 140 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 FAM27E3Q08E93 113 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 ZNF833PQ6ZTB9 187 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 THAP8Q8NA92 274 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 V9GYY9 64 aa5.73□□□□□ -1.49
CDKL5-201ENST00000379989 GPR179Q6PRD1 2367 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 J3QQQ9 107 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 UPK2O00526 184 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 SPRY3O43610 288 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 LAGE3Q14657 143 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 C17orf58Q2M2W7 97 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 RUSC1-AS1Q66K80 236 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 TRAV13-1A0A0B4J241 112 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 ZNF415Q09FC8 603 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 C5orf38Q86SI9 138 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 SHANK2-AS3Q9BTD1 123 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 HIST1H4AP62805 103 aaKnown RBP5.72□□□□□ -1.49
CDKL5-201ENST00000379989 BSPH1Q075Z2 132 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 C10orf105Q8TEF2 133 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 UPK3BQ9BT76 320 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 TPSG1Q9NRR2 321 aa5.72□□□□□ -1.49
CDKL5-201ENST00000379989 CACNA1HO95180 2353 aa5.71□□□□□ -1.49
CDKL5-201ENST00000379989 H3BT86 120 aa5.71□□□□□ -1.49
CDKL5-201ENST00000379989 SH2D1AO60880 128 aa5.71□□□□□ -1.49
CDKL5-201ENST00000379989 NSUN5P1Q3KNT7 163 aa5.71□□□□□ -1.49
CDKL5-201ENST00000379989 ZCCHC24Q8N2G6 241 aaKnown RBP5.71□□□□□ -1.49
CDKL5-201ENST00000379989 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.49
CDKL5-201ENST00000379989 NEXN-AS1Q8NBZ9 246 aa5.71□□□□□ -1.49
CDKL5-201ENST00000379989 DYNLRB1Q9NP97 96 aa5.71□□□□□ -1.49
CDKL5-201ENST00000379989 BEX4Q9NWD9 120 aaPredicted RBP5.71□□□□□ -1.49
CDKL5-201ENST00000379989 LINC00643Q86TS7 51 aa5.71□□□□□ -1.5
CDKL5-201ENST00000379989 EEF1AKMT3Q96AZ1 226 aa5.71□□□□□ -1.5
CDKL5-201ENST00000379989 E7EUB6 86 aa5.71□□□□□ -1.5
CDKL5-201ENST00000379989 MSMPQ1L6U9 139 aa5.71□□□□□ -1.5
CDKL5-201ENST00000379989 C14orf178Q8N769 122 aaPredicted RBP5.71□□□□□ -1.5
CDKL5-201ENST00000379989 DPH3P1Q9H4G8 78 aa5.71□□□□□ -1.5
CDKL5-201ENST00000379989 FAM236DA0A1B0GTK5 79 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 ATOX1O00244 68 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 TRIAP1O43715 76 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 FAM236CP0DP71 79 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 SUB1P53999 127 aaKnown RBP eCLIP5.7□□□□□ -1.5
CDKL5-201ENST00000379989 ZNF575Q86XF7 245 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 LEAP2Q969E1 77 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 C9orf85Q96MD7 179 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 AGPAT4-IT1Q9H0P7 198 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 SAA2P0DJI9 122 aaPredicted RBP5.7□□□□□ -1.5
CDKL5-201ENST00000379989 CXCL5P42830 114 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 Q1RN00 199 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 IL17RELQ6ZVW7 336 aa5.7□□□□□ -1.5
CDKL5-201ENST00000379989 DSCAMO60469 2012 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 A0A0B4J2C4 111 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 SPRY2O43597 315 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 ACYP1P07311 99 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 C17orf77Q96MU5 243 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 TRBV30A0A0K0K1B3 111 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 IGKV1-16P04430 117 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 EGR2P11161 476 aaPredicted RBP5.69□□□□□ -1.5
CDKL5-201ENST00000379989 TSPEAR-AS2P59090 65 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 TMEM167AQ8TBQ9 72 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 KLK15Q9H2R5 256 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 PRORYQ9H606 182 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 NDUFA4L2Q9NRX3 87 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 M0R1W7 72 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 ERHP84090 104 aaKnown RBP5.69□□□□□ -1.5
CDKL5-201ENST00000379989 SDIM1Q6ZPB5 146 aa5.69□□□□□ -1.5
CDKL5-201ENST00000379989 ABCA1O95477 2261 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 SAA1P0DJI8 122 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-201ENST00000379989 WT1-ASQ06250 92 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 VMA21Q3ZAQ7 101 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 NRACQ8N912 160 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 E7EQL1 145 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 AVPP01185 164 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 PVRIGQ6DKI7 326 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 ZNRF1Q8ND25 227 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 PSMG3-AS1Q96PY0 264 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 SCGB3A1Q96QR1 104 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 CNFNQ9BYD5 112 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 M0R3E3 92 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 PRR14LQ5THK1 2151 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 AMELXQ99217 191 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 TMEM14CQ9P0S9 112 aa5.68□□□□□ -1.5
CDKL5-201ENST00000379989 CUL9Q8IWT3 2517 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 TRAV26-2A0A0B4J265 109 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 TMEM223A0PJW6 202 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 CGB1A6NKQ9 187 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 CCL13Q99616 98 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 LAMA5O15230 3695 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 CFAP47Q6ZTR5 3102 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 TRBV19A0A075B6N1 114 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 CCL21O00585 134 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 LY6G5BQ8NDX9 201 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 PRRC2AP48634 2157 aaKnown RBP5.67□□□□□ -1.5
CDKL5-201ENST00000379989 PLCE1Q9P212 2302 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.67□□□□□ -1.5
CDKL5-201ENST00000379989 ZNF80P51504 273 aaPredicted RBP5.67□□□□□ -1.5
CDKL5-201ENST00000379989 C1orf195Q5TG92 126 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 TOMM6Q96B49 74 aa5.67□□□□□ -1.5
CDKL5-201ENST00000379989 RNF125Q96EQ8 232 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms