RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 SHISA2Q6UWI4 295 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 BPIFA4PQ86YQ2 179 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 OSR1Q8TAX0 266 aaPredicted RBP5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 CHAC1Q9BUX1 264 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 INS-IGF2F8WCM5 200 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 ZFP36P26651 326 aaKnown RBP5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 SMR3AQ99954 134 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 PEF1Q9UBV8 284 aaKnown RBP5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 E9PLD3 99 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 PLP1P60201 277 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 G3V318 75 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 TRGV9Q99603 122 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 BRI3O95415 125 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 LEPP41159 167 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 C12orf54Q6X4T0 127 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 OR10X1Q8NGY0 326 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 AMELXQ99217 191 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 TM2D2Q9BX73 214 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 A8MZ25 164 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 NPFFO15130 113 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 NDUFA3O95167 84 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 SHANK2-AS3Q9BTD1 123 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 ENY2Q9NPA8 101 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 SMPXQ9UHP9 88 aa5.53□□□□□ -1.52
GPCPD1-201ENST00000379019 TAS2R45P59539 299 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 PRIMA1Q86XR5 153 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 DNAH7Q8WXX0 4024 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 TMEM189A5PLL7 270 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 BUB1B-PAK6H3BSN5 160 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 C3orf56Q8N813 242 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 TMEM191AQ9H0A3 160 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 TNFRSF6BO95407 300 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 RPL39P62891 51 aaKnown RBP5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 LINC00311Q8N616 119 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 CT83Q5H943 113 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 VMO1Q7Z5L0 202 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 CYSLTR1Q9Y271 337 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 HECTD1Q9ULT8 2610 aa5.52□□□□□ -1.53
GPCPD1-201ENST00000379019 GHRHP01286 108 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 CRYBA4P53673 196 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 LGALS9BQ3B8N2 356 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 LGALS9CQ6DKI2 356 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 ONECUT1Q9UBC0 465 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 ODF3BA8MYP8 253 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 TWIST1Q15672 202 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 RNF125Q96EQ8 232 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 GFRA4Q9GZZ7 299 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 UNQ9165/PRO28630Q6UXU0 137 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 MAPK1IP1LQ8NDC0 245 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 RAB9AP51151 201 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 FOXI2Q6ZQN5 318 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 TMEM190Q8WZ59 177 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 VPREB3Q9UKI3 123 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 CENPVL3A0A0U1RRI6 287 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 ERHP84090 104 aaKnown RBP5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 HSD52Q0P140 79 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 C12orf74Q32Q52 190 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 CCDC140Q96MF4 163 aa5.51□□□□□ -1.53
GPCPD1-201ENST00000379019 AGPAT4-IT1Q9H0P7 198 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 RPL27AP46776 148 aaKnown RBP5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 CEND1Q8N111 149 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 LINC00477Q96M19 166 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 MS4A6AQ9H2W1 248 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 HIGD1AQ9Y241 93 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 DNAJC9-AS1A6NH13 148 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 Q8N2B8 174 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 ZFAND3Q9H8U3 227 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 OTORQ9NRC9 128 aa5.5□□□□□ -1.53
GPCPD1-201ENST00000379019 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 LINC01546A6NGU7 62 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 CD7P09564 240 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 ZNRF2Q8NHG8 242 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 IGLV11-55A0A075B6I3 123 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 C10orf99Q6UWK7 81 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 IGLV4-69A0A075B6H9 119 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 HBDP02042 147 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 LGALS1P09382 135 aaKnown RBP5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 CKS2P33552 79 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 CHTOPQ9Y3Y2 248 aaKnown RBP5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 GNRH2O43555 120 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 ORMDL3Q8N138 153 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 Q8N1Y9 231 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 RNF183Q96D59 192 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 ADTRPQ96IZ2 230 aa5.49□□□□□ -1.53
GPCPD1-201ENST00000379019 LINC00315P59091 139 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 RNF5Q99942 180 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 KIR2DS2P43631 304 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 KRTAP24-1Q3LI83 254 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 CFAP126Q5VTH2 177 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 SAMD13Q5VXD3 122 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 TENM2Q9NT68 2774 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 SMIM17P0DL12 118 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 STXBP6Q8NFX7 210 aa5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 DUSP14O95147 198 aaKnown RBP5.48□□□□□ -1.53
GPCPD1-201ENST00000379019 RPS20P60866 119 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms