RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 SLC25A16P16260 332 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 C17orf58Q2M2W7 97 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 ZNF295-AS1Q8N0V1 137 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 CYSTM1Q9H1C7 97 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 BEX4Q9NWD9 120 aaPredicted RBP8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 HIGD1CA8MV81 97 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 CNTFRP26992 372 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 NTN5Q8WTR8 489 aaPredicted RBP8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 EEF1AKMT3Q96AZ1 226 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 NPCDR1Q9BY65 106 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 IGHV4-61A0A0C4DH41 118 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 PRNTQ86SH4 94 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 NUP35Q8NFH5 326 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 C2CD3Q4AC94 2353 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 IGHV4-30-2A0A087WSY4 118 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 MLANAQ16655 118 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 LINC00305Q7Z4B0 112 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 LINC01356Q8N9X3 169 aa8.49□□□□□ -1.05
PCDHGA1-201ENST00000378105 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 IGHV4-39P01824 125 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 PF4P02776 101 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 IGHV3OR16-12A0A075B7B8 117 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 M0R1W7 72 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 C8orf88P0DMB2 117 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 SORL1Q92673 2214 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 PFN2P35080 140 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 LOXL1Q08397 574 aaPredicted RBP8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 TEX36Q5VZQ5 186 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 FAM110DQ8TAY7 271 aaPredicted RBP8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 PGLYRP4Q96LB8 373 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 PRSS22Q9GZN4 317 aa8.48□□□□□ -1.05
PCDHGA1-201ENST00000378105 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 Q5XG85 94 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 MXRA5Q9NR99 2828 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 TRAV8-4A0A0B4J246 113 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 PRCDQ00LT1 54 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 FAM19A4Q96LR4 140 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 TRAV9-1A0A075B6T8 112 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 CFPP27918 469 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 ZNF843Q8N446 348 aa8.47□□□□□ -1.05
PCDHGA1-201ENST00000378105 NIPBLQ6KC79 2804 aaeCLIP8.46□□□□□ -1.05
PCDHGA1-201ENST00000378105 ZNF747Q9BV97 191 aa8.46□□□□□ -1.05
PCDHGA1-201ENST00000378105 F5H697 171 aa8.46□□□□□ -1.06
PCDHGA1-201ENST00000378105 CRYGBP07316 175 aa8.46□□□□□ -1.06
PCDHGA1-201ENST00000378105 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.46□□□□□ -1.06
PCDHGA1-201ENST00000378105 C15orf65H3BRN8 121 aa8.46□□□□□ -1.06
PCDHGA1-201ENST00000378105 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
PCDHGA1-201ENST00000378105 LINC00482Q8N8I6 264 aa8.46□□□□□ -1.06
PCDHGA1-201ENST00000378105 NXT2Q9NPJ8 142 aaKnown RBP8.46□□□□□ -1.06
PCDHGA1-201ENST00000378105 KRTAP27-1Q3LI81 207 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 MINOS1Q5TGZ0 78 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 ZNF414Q96IQ9 312 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 MOB4Q9Y3A3 225 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 MINOS1-NBL1R4GNA1 71 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 FAM90A9PA6NNJ1 464 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 HOXA3O43365 443 aaPredicted RBP8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 C15orf32Q32M92 178 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 Q6ZS49 121 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 CRIP2P52943 208 aaPredicted RBP8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 DLX6P56179 175 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 MIR17HGQ75NE6 70 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 DPH3Q96FX2 82 aa8.45□□□□□ -1.06
PCDHGA1-201ENST00000378105 GCHFRP30047 84 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 CD69Q07108 199 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 PIP4P2Q8N4L2 257 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 FBXL19-AS1Q494R0 122 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 G3V318 75 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 TCL1BO95988 128 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 ATP6V0E2Q8NHE4 81 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 IGHV1-69DA0A0B4J2H0 117 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 P01737 135 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 IGHV1-69P01742 117 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 UBE2E1P51965 193 aa8.44□□□□□ -1.06
PCDHGA1-201ENST00000378105 TAL2Q16559 108 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 LYPD6Q86Y78 171 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 TMEM167AQ8TBQ9 72 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 LHBP01229 141 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 HLA-DRB4P13762 266 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 LINC01561Q8N1V8 128 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 HLA-DRB4X5D2U9 266 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 OTOGQ6ZRI0 2925 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 TRACP01848 142 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 PYYP10082 97 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 ASIPP42127 132 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
PCDHGA1-201ENST00000378105 IGKV1-39P01597 117 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 IGKV1D-39P04432 117 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 PRSS1P07477 247 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 KAAG1Q9UBP8 84 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 J3QQQ9 107 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 DEFB113Q30KQ7 82 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms