RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 ZC2HC1BQ5TFG8 222 aa10.9□□□□□ -0.66
ZKSCAN4-201ENST00000377294 PEF1Q9UBV8 284 aaKnown RBP10.9□□□□□ -0.66
ZKSCAN4-201ENST00000377294 SMPXQ9UHP9 88 aa10.9□□□□□ -0.66
ZKSCAN4-201ENST00000377294 DPF1Q92782 380 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 JMJD8Q96S16 334 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 PTPN13Q12923 2485 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 TRAV12-2A0A075B6T6 113 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 RNF223E7ERA6 249 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 H3BUA1 57 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
ZKSCAN4-201ENST00000377294 TRAV12-3A0A0B4J271 114 aa10.88□□□□□ -0.67
ZKSCAN4-201ENST00000377294 A0A0G2JLM5 398 aa10.88□□□□□ -0.67
ZKSCAN4-201ENST00000377294 TGFAP01135 160 aa10.88□□□□□ -0.67
ZKSCAN4-201ENST00000377294 DCANP1Q8TF63 244 aa10.88□□□□□ -0.67
ZKSCAN4-201ENST00000377294 CST9LQ9H4G1 147 aa10.88□□□□□ -0.67
ZKSCAN4-201ENST00000377294 LENEPQ9Y5L5 61 aa10.88□□□□□ -0.67
ZKSCAN4-201ENST00000377294 PSMB8P28062 276 aa10.88□□□□□ -0.67
ZKSCAN4-201ENST00000377294 UBR5O95071 2799 aaPredicted RBP10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 A0A087WWL8 130 aa10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 DPM2O94777 84 aa10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 KRTAP10-9P60411 292 aa10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 OCIAD2Q56VL3 154 aa10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 PSMG4Q5JS54 123 aa10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 MYOZ3Q8TDC0 251 aa10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 BBC3Q96PG8 261 aaPredicted RBP10.87□□□□□ -0.67
ZKSCAN4-201ENST00000377294 SUMO2P61956 95 aaKnown RBP10.86□□□□□ -0.67
ZKSCAN4-201ENST00000377294 SRSF1Q07955 248 aaKnown RBP eCLIP10.86□□□□□ -0.67
ZKSCAN4-201ENST00000377294 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
ZKSCAN4-201ENST00000377294 A0A096LNT2 108 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 H3BUT2 72 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 MRAP2Q96G30 205 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 VPS25Q9BRG1 176 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 K7ERJ3 54 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 FXYD2P54710 66 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 SYNJ2BPP57105 145 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 HSD52Q0P140 79 aa10.85□□□□□ -0.67
ZKSCAN4-201ENST00000377294 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 BRI3O95415 125 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 GCSHP23434 173 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 C18orf65Q6ZTR6 163 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 OR9G4Q8NGQ1 327 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 SEC11AP67812 179 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 LINC01356Q8N9X3 169 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 BEX4Q9NWD9 120 aaPredicted RBP10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
ZKSCAN4-201ENST00000377294 KLLNB2CW77 178 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 ATP5LO75964 103 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 CD7P09564 240 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 DEFB136Q30KP8 78 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 APRG1Q8IVJ8 170 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 TRBV25-1A0A075B6N4 114 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 IGHV4OR15-8A0A075B7B6 117 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 A0A087WW49 117 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 A0A087WX48 190 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 SCGB3A1Q96QR1 104 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 CHAC1Q9BUX1 264 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 CSTL1Q9H114 145 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 NF1P21359 2839 aa10.83□□□□□ -0.68
ZKSCAN4-201ENST00000377294 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 FAM74A4Q5TZK3 123 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 FAM159AQ6UWV7 190 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 MDFICQ9P1T7 246 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 CREBBPQ92793 2442 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 EMP1P54849 157 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 LINC00315P59091 139 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 NAV2Q8IVL1 2488 aa10.82□□□□□ -0.68
ZKSCAN4-201ENST00000377294 CR1P17927 2039 aa10.81□□□□□ -0.68
ZKSCAN4-201ENST00000377294 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
ZKSCAN4-201ENST00000377294 KIF25-AS1Q9Y6Z4 181 aa10.81□□□□□ -0.68
ZKSCAN4-201ENST00000377294 NIPBLQ6KC79 2804 aaeCLIP10.81□□□□□ -0.68
ZKSCAN4-201ENST00000377294 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
ZKSCAN4-201ENST00000377294 APCP25054 2843 aa10.81□□□□□ -0.68
ZKSCAN4-201ENST00000377294 A6NDN8 102 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 C9orf118A6NHY6 69 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 K7EMT4 169 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 SIVA1O15304 175 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 DUSP14O95147 198 aaKnown RBP10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 PRM2P04554 102 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 ID1P41134 155 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 SUMO4Q6EEV6 95 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 TOMM6Q96B49 74 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 F5H697 171 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 H3BRM9 83 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 HOXA3O43365 443 aaPredicted RBP10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 RPL39P62891 51 aaKnown RBP10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 BAALCQ8WXS3 180 aa10.8□□□□□ -0.68
ZKSCAN4-201ENST00000377294 SLC25A16P16260 332 aa10.79□□□□□ -0.68
ZKSCAN4-201ENST00000377294 CHTOPQ9Y3Y2 248 aaKnown RBP10.79□□□□□ -0.68
ZKSCAN4-201ENST00000377294 GAGE12BA1L429 117 aa10.79□□□□□ -0.68
ZKSCAN4-201ENST00000377294 ORMDL2Q53FV1 153 aa10.79□□□□□ -0.68
ZKSCAN4-201ENST00000377294 NEXN-AS1Q8NBZ9 246 aa10.79□□□□□ -0.68
ZKSCAN4-201ENST00000377294 ZNF702PQ9H963 129 aa10.79□□□□□ -0.68
ZKSCAN4-201ENST00000377294 EPG5Q9HCE0 2579 aa10.78□□□□□ -0.68
ZKSCAN4-201ENST00000377294 CHD6Q8TD26 2715 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms