RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 IL17DQ8TAD2 202 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 TMEM263Q8WUH6 116 aaKnown RBP12.21□□□□□ -0.46
HLA-F-218ENST00000376861 YPEL4Q96NS1 127 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 TPPP3Q9BW30 176 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 TRBV24-1A0A075B6N3 115 aa12.2□□□□□ -0.46
HLA-F-218ENST00000376861 IGLC6P0CF74 106 aa12.2□□□□□ -0.46
HLA-F-218ENST00000376861 MED14OSP0DP75 135 aa12.2□□□□□ -0.46
HLA-F-218ENST00000376861 C11orf45Q8TAV5 145 aa12.2□□□□□ -0.46
HLA-F-218ENST00000376861 BORCS7Q96B45 105 aa12.2□□□□□ -0.46
HLA-F-218ENST00000376861 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
HLA-F-218ENST00000376861 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
HLA-F-218ENST00000376861 F2Z2F3 143 aa12.19□□□□□ -0.46
HLA-F-218ENST00000376861 GNRH2O43555 120 aa12.19□□□□□ -0.46
HLA-F-218ENST00000376861 SPART-AS1P0CW21 52 aa12.19□□□□□ -0.46
HLA-F-218ENST00000376861 AZU1P20160 251 aa12.19□□□□□ -0.46
HLA-F-218ENST00000376861 CTRLP40313 264 aa12.19□□□□□ -0.46
HLA-F-218ENST00000376861 EDA2RQ9HAV5 297 aa12.19□□□□□ -0.46
HLA-F-218ENST00000376861 H3BVH4 76 aa12.18□□□□□ -0.46
HLA-F-218ENST00000376861 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
HLA-F-218ENST00000376861 LYZL1Q6UWQ5 148 aa12.18□□□□□ -0.46
HLA-F-218ENST00000376861 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
HLA-F-218ENST00000376861 TGP01266 2768 aa12.18□□□□□ -0.46
HLA-F-218ENST00000376861 TGIF2-C20orf24A0A0A6YYL0 155 aa12.17□□□□□ -0.46
HLA-F-218ENST00000376861 A0A1B0GUT8 65 aa12.17□□□□□ -0.46
HLA-F-218ENST00000376861 ARMS2P0C7Q2 107 aa12.17□□□□□ -0.46
HLA-F-218ENST00000376861 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
HLA-F-218ENST00000376861 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
HLA-F-218ENST00000376861 TP53TG3Q9ULZ0 132 aa12.17□□□□□ -0.46
HLA-F-218ENST00000376861 IGHV3-16A0A0C4DH30 117 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 COLCA2A8K830 154 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 SNAI2O43623 268 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 SPINK4O60575 86 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
HLA-F-218ENST00000376861 FAM210BQ96KR6 192 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 RNASE3P12724 160 aaKnown RBP12.16□□□□□ -0.46
HLA-F-218ENST00000376861 RIGQ13278 110 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 FAM222AQ5U5X8 452 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
HLA-F-218ENST00000376861 WDR73Q6P4I2 378 aa12.16□□□□□ -0.46
HLA-F-218ENST00000376861 A0A1B0GW15 77 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 CACNG7P62955 275 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 RASL11AQ6T310 242 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-218ENST00000376861 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 NOP10Q9NPE3 64 aaKnown RBP12.15□□□□□ -0.46
HLA-F-218ENST00000376861 SCRT2Q9NQ03 307 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.46
HLA-F-218ENST00000376861 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 S100A8P05109 93 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 DAD1P61803 113 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 HBBP68871 147 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 COX19Q49B96 90 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 C9orf85Q96MD7 179 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 MDFICQ9P1T7 246 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 DNAH9Q9NYC9 4486 aa12.14□□□□□ -0.47
HLA-F-218ENST00000376861 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
HLA-F-218ENST00000376861 OR10AG1Q8NH19 301 aa12.13□□□□□ -0.47
HLA-F-218ENST00000376861 MUC7Q8TAX7 377 aa12.13□□□□□ -0.47
HLA-F-218ENST00000376861 CELA1Q9UNI1 258 aa12.13□□□□□ -0.47
HLA-F-218ENST00000376861 TENM3Q9P273 2699 aa12.13□□□□□ -0.47
HLA-F-218ENST00000376861 A0A1B0GXF2 115 aa12.12□□□□□ -0.47
HLA-F-218ENST00000376861 DEFB130BP0DP73 79 aa12.12□□□□□ -0.47
HLA-F-218ENST00000376861 DEFB130AP0DP74 79 aa12.12□□□□□ -0.47
HLA-F-218ENST00000376861 RAB5AP20339 215 aa12.12□□□□□ -0.47
HLA-F-218ENST00000376861 MUC4Q99102 2169 aa12.12□□□□□ -0.47
HLA-F-218ENST00000376861 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 MUC21A0A0G2JKD1 596 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 MUC21A0A140T8X8 626 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 TWIST1Q15672 202 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 ZFP82Q8N141 532 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 C11orf72Q8NBR9 251 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 SPXQ9BT56 116 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 NTF3P20783 257 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 CAMPP49913 170 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 SSTP61278 116 aa12.11□□□□□ -0.47
HLA-F-218ENST00000376861 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
HLA-F-218ENST00000376861 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
HLA-F-218ENST00000376861 M0R381 172 aa12.1□□□□□ -0.47
HLA-F-218ENST00000376861 NXPH4O95158 308 aa12.1□□□□□ -0.47
HLA-F-218ENST00000376861 MT-ND6P03923 174 aa12.1□□□□□ -0.47
HLA-F-218ENST00000376861 RPS10P46783 165 aaKnown RBP12.1□□□□□ -0.47
HLA-F-218ENST00000376861 RAB4BP61018 213 aa12.1□□□□□ -0.47
HLA-F-218ENST00000376861 DAZ2Q13117 558 aaKnown RBP12.1□□□□□ -0.47
HLA-F-218ENST00000376861 GNB1LQ9BYB4 327 aa12.1□□□□□ -0.47
HLA-F-218ENST00000376861 HUWE1Q7Z6Z7 4374 aaKnown RBP12.09□□□□□ -0.47
HLA-F-218ENST00000376861 TRGV2A0A075B6R0 118 aa12.09□□□□□ -0.47
HLA-F-218ENST00000376861 SMIM15Q7Z3B0 74 aa12.09□□□□□ -0.47
HLA-F-218ENST00000376861 GAGE12BA1L429 117 aa12.08□□□□□ -0.48
HLA-F-218ENST00000376861 C3orf84H3BNL1 204 aa12.08□□□□□ -0.48
HLA-F-218ENST00000376861 M0R2P5 195 aa12.08□□□□□ -0.48
HLA-F-218ENST00000376861 GAGE7O76087 117 aa12.08□□□□□ -0.48
HLA-F-218ENST00000376861 HLA-DQA1P01909 254 aa12.08□□□□□ -0.48
HLA-F-218ENST00000376861 TRGC1P0CF51 173 aa12.08□□□□□ -0.48
HLA-F-218ENST00000376861 GAGE12FP0CL80 117 aa12.08□□□□□ -0.48
HLA-F-218ENST00000376861 GAGE12GP0CL81 117 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms