RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 ANKRD29Q8N6D5 301 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 A8MWV9 139 aa13.31□□□□□ -0.28
LDLRAP1-201ENST00000374338 G3V318 75 aa13.31□□□□□ -0.28
LDLRAP1-201ENST00000374338 CRLF1O75462 422 aa13.31□□□□□ -0.28
LDLRAP1-201ENST00000374338 EGR2P11161 476 aaPredicted RBP13.31□□□□□ -0.28
LDLRAP1-201ENST00000374338 FAM159AQ6UWV7 190 aa13.31□□□□□ -0.28
LDLRAP1-201ENST00000374338 ABCA12Q86UK0 2595 aa13.31□□□□□ -0.28
LDLRAP1-201ENST00000374338 ZNF80P51504 273 aaPredicted RBP13.31□□□□□ -0.28
LDLRAP1-201ENST00000374338 BPESC1Q9GZL8 116 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 H3BVH4 76 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 SNCGO76070 127 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 NDUFA3O95167 84 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 TCL1BO95988 128 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 LINC01559Q495D7 138 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 C11orf71Q6IPW1 123 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 TLN2Q9Y4G6 2542 aa13.3□□□□□ -0.28
LDLRAP1-201ENST00000374338 F8W735 103 aaPredicted RBP13.29□□□□□ -0.28
LDLRAP1-201ENST00000374338 VPREB3Q9UKI3 123 aa13.29□□□□□ -0.28
LDLRAP1-201ENST00000374338 OR11H6Q8NGC7 330 aa13.29□□□□□ -0.28
LDLRAP1-201ENST00000374338 RNF185Q96GF1 192 aa13.29□□□□□ -0.28
LDLRAP1-201ENST00000374338 NXT2Q9NPJ8 142 aaKnown RBP13.29□□□□□ -0.28
LDLRAP1-201ENST00000374338 PVRIGQ6DKI7 326 aa13.29□□□□□ -0.28
LDLRAP1-201ENST00000374338 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
LDLRAP1-201ENST00000374338 CREBBPQ92793 2442 aa13.28□□□□□ -0.28
LDLRAP1-201ENST00000374338 UBE2D1P51668 147 aa13.28□□□□□ -0.28
LDLRAP1-201ENST00000374338 PPDPFQ9H3Y8 114 aa13.28□□□□□ -0.28
LDLRAP1-201ENST00000374338 TNFRSF6BO95407 300 aa13.28□□□□□ -0.28
LDLRAP1-201ENST00000374338 TGFAP01135 160 aa13.28□□□□□ -0.28
LDLRAP1-201ENST00000374338 FBXL19-AS1Q494R0 122 aa13.28□□□□□ -0.28
LDLRAP1-201ENST00000374338 TMEM14CQ9P0S9 112 aa13.28□□□□□ -0.28
LDLRAP1-201ENST00000374338 TRAV26-2A0A0B4J265 109 aa13.27□□□□□ -0.28
LDLRAP1-201ENST00000374338 GNLYP22749 145 aa13.27□□□□□ -0.28
LDLRAP1-201ENST00000374338 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.28
LDLRAP1-201ENST00000374338 RNF182Q8N6D2 247 aa13.27□□□□□ -0.28
LDLRAP1-201ENST00000374338 J3KRW8 73 aa13.27□□□□□ -0.29
LDLRAP1-201ENST00000374338 SCGB2A1O75556 95 aa13.27□□□□□ -0.29
LDLRAP1-201ENST00000374338 C21orf62Q9NYP8 219 aa13.27□□□□□ -0.29
LDLRAP1-201ENST00000374338 H3BRN7 92 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 LGALS1P09382 135 aaKnown RBP13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 EFNA4P52798 201 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 KLK15Q9H2R5 256 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 ODF3BA8MYP8 253 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 ORM1P02763 201 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 IGHV7-81A0A0B4J1V7 117 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 SAA4P35542 130 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 ASIPP42127 132 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 MEIG1Q5JSS6 88 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 Q6ZQT7 251 aa13.26□□□□□ -0.29
LDLRAP1-201ENST00000374338 IGLV11-55A0A075B6I3 123 aa13.25□□□□□ -0.29
LDLRAP1-201ENST00000374338 TRAV8-2A0A0B4J237 113 aa13.25□□□□□ -0.29
LDLRAP1-201ENST00000374338 ERCC8Q13216 396 aa13.25□□□□□ -0.29
LDLRAP1-201ENST00000374338 LYRM7Q5U5X0 104 aa13.25□□□□□ -0.29
LDLRAP1-201ENST00000374338 MYOZ3Q8TDC0 251 aa13.25□□□□□ -0.29
LDLRAP1-201ENST00000374338 MFAP4P55083 255 aa13.25□□□□□ -0.29
LDLRAP1-201ENST00000374338 SORL1Q92673 2214 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 Q6Q795 121 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 ZNF575Q86XF7 245 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 DEFB104AQ8WTQ1 72 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 ATP6V0E1O15342 81 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 CTSGP08311 255 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 PLNP26678 52 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 C15orf32Q32M92 178 aa13.24□□□□□ -0.29
LDLRAP1-201ENST00000374338 M0QXV9 152 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 TMEM78Q5T7P6 136 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 SPRY2O43597 315 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 CD7P09564 240 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 CLEC19AQ6UXS0 136 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 NPBQ8NG41 125 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 IGLV2-18A0A075B6J9 118 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 MRPS12O15235 138 aaKnown RBP13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 Q8N8P6 123 aa13.23□□□□□ -0.29
LDLRAP1-201ENST00000374338 ZNF462Q96JM2 2506 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 SETD2Q9BYW2 2564 aaPredicted RBP13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 ATP5J2P56134 94 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 Q8N9W7 124 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 RASL10AQ92737 203 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 SMAD5-AS1Q9Y6J3 95 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 PTPN13Q12923 2485 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 TRGV3P03979 118 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 SCGB1C2P0DMR2 95 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 DEFB1P60022 68 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 NRGNQ92686 78 aa13.22□□□□□ -0.29
LDLRAP1-201ENST00000374338 IGKV3-7A0A075B6H7 116 aa13.21□□□□□ -0.29
LDLRAP1-201ENST00000374338 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
LDLRAP1-201ENST00000374338 AAMDCQ9H7C9 122 aa13.21□□□□□ -0.29
LDLRAP1-201ENST00000374338 SPANXA1Q9NS26 97 aa13.21□□□□□ -0.29
LDLRAP1-201ENST00000374338 MXRA5Q9NR99 2828 aa13.21□□□□□ -0.29
LDLRAP1-201ENST00000374338 IGLC6P0CF74 106 aa13.21□□□□□ -0.3
LDLRAP1-201ENST00000374338 LY6EQ16553 131 aa13.21□□□□□ -0.3
LDLRAP1-201ENST00000374338 NDUFA11Q86Y39 141 aa13.21□□□□□ -0.3
LDLRAP1-201ENST00000374338 M0R1W7 72 aa13.2□□□□□ -0.3
LDLRAP1-201ENST00000374338 IGHG4P01861 327 aa13.2□□□□□ -0.3
LDLRAP1-201ENST00000374338 PRR25Q96S07 402 aa13.2□□□□□ -0.3
LDLRAP1-201ENST00000374338 PLEKHB2Q96CS7 222 aa13.2□□□□□ -0.3
LDLRAP1-201ENST00000374338 F8VRH5 84 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 SLC25A20O43772 301 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 C3orf56Q8N813 242 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 SIRPDQ9H106 197 aa13.19□□□□□ -0.3
LDLRAP1-201ENST00000374338 FBN2P35556 2912 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms